| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2318 |
|---|
| Symbol | |
|---|
| ID | 5155853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 2397222 |
|---|
| End bp | 2400686 |
|---|
| Gene Length | 3465 bp |
|---|
| Protein Length | 1154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640557241 |
|---|
| Product | condensin subunit Smc |
|---|
| Protein accession | YP_001238397 |
|---|
| Protein GI | 148253812 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1196] Chromosome segregation ATPases |
|---|
| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCA CGCGTCTTCG TCTTCACGGT TTCAAGACGT TCGTCGAACC GACTGATTTC
GTGATCGAAC CCGGCCTCAC CGGCGTCGTC GGTCCGAACG GCTGCGGCAA GTCGAATCTG
GTCGAGGCGC TGCGCTGGGC GATGGGCGAG ACCTCGCACA AATCTCTGCG CGCGGCTGAC
ATGGACGCGG TGATCTTCTC CGGCTCGAAC ACCCGTCCGG CGCGCAACCA CGCCGAAGTG
GTGATGACGA TCGACAACAG CGATCGTACC GCGCCGGCCG CCGTCAACGA CCGCGACATT
CTCGAAATCT CGCGCCGCAT CGAGCGCGAG GCCGGCTCGG TCTATCGCAT CAACGGCCGC
GACGTGCGCG CCCGCGACGT GCAGATCCTG TTCGCCGACG CCGCCACCGG CGCGCGCTCA
CCGGCGCTGG TCCACCAGGG CAAGATCGGC GAGATCATTC AAGCCAAACC CGAGCAGCGC
CGCCGCGTGC TGGAAGACGC CGCCGGCGTC GCCGGCCTGC ATGCGCGCCG CCACGAGGCC
GAACTGCGGC TGAAGGCGGC CGAGACGAAC CTGCTGCGCG TCGAGGACGT CATCGGCCAG
CTCTCCGGCC AGATGGAAGG CCTGCGCAAG CAGGCGCGCC AGGCGATCCG CTATCGCGAG
GTCGCCGCCA AGGTGCGCAA GGCGGAAGCC ACGCTCTATC ATCTGCGCTG GATGGGCGCG
CATGCCGACC TCAACGACGC CGCGCGGGTG CACGATCTCA GCGTGCGCGA GATGGCGGAG
CGGACCCGCG AGCAGGCCGA ATCGGCCCGC ATCCAGGCCA TCCGCTCGTC GCATCTGCCG
GCGCTGCGCG AGGCCGAGGC CCGTGCCGCG GCGACGATGC AGCGGCTGAA GAATGCCCGC
GACCTACTCG ACCGCGAGGA GCTGCGTGCC AAGGAGCGCG CCGGCGAGCT CGACCGCCGC
CTGATGCAGC TCACTGCCGA CGTCGCGCGC GAGCAGCAGC AGAACCAGGA TGCCCAGGTC
GCGCTGCAGC GCCTGGAGAC CGAAGACGCG GAGCTGAAGG AAGAGATCAA GGCGCGCGTC
GAGATGCGCA GCGGCGTCGA CGAGCGTGTC GCCGAGGCCG AGGCGCTGCT CGCCGAGACC
GAGCGCCAGT TCACCGAGCT GACGACGCAG CTCGCCGATC TCACCGCGCG GCGCAACCAG
CTCGAAGCCA ACGTCCGCAG CCATCGCGAC CGGCTGGCCC GCCTCGACCA GGACATCGCC
AATGTCCGCG CCGACGAGGA GCGGCTGGCG CAGGAGACCG CCCATCTCGG CGACCTCGAC
ACGCTCGCGG CCGCGCTCGA AGCGGCCGAA GAGGCCGAGG CGCAGGCCGA GGCCGCGGTG
CAGACCAACG AGTCGGCGCA GGCCGCCGCG CGGCAGAAGC TCGAAGCCTC GCGCGCCCCG
CTCGCCGAGG CCGAGAAGCG TGCGCAGCGG CTGGAGACCG AGGCGCGCAC CATCTCCAAG
ATGGTCAACA GCGAGACCAA GAATCTGTGG CCGCCGATCA TCGACGGCGT CACCGTCGCC
AAGGGCTATG AGAAGGCGCT CGGCGCCGTG CTCGGCGACG ATCTCGATGC GCCCGTCGAT
GCCTCCGCGC CGATGCACTG GACCGTGGCA GGCGCCGAGG TCACCGATCC CGCGCTGCCC
GATGGCGTCG AGCCGCTCGC GGCCTATGTC CAGGCGCCGC CGGAGCTGTC GCGGCGGCTC
GCCCAGATCG GCGTCGTGTC GCGCGATCGC GGTGCCCAGC TGGTGTCGCA GCTGCGCACC
GGCCAGCGGC TGGTGTCGCC GGAAGGCGAC GTCTGGCGCT GGGACGGCTT CATCGCCGCC
GCGCATGCGC CGACCGGCGC GGCCCGCCGT CTTGCCGAGC GCGCCCGCCT GATCGACATC
GAGGCCGAGC TGGAGCAGGC GCGCATCGAT GCGACGAACA AGCGCCAGGC GCTGGAGAGC
GCAGAGGCCG AGGTGAAGGC GGCGACATCA GCCGAGAGCG CCGCGCGCGA AGCCTGGCGC
GCCGCCCAGC GCGAGGTCAA TTCGGCGCGC GAGCGCCACG CCAATGCCGA GCGCGAGATC
AACCGCCATT CGGCGCGCAA ATCGGCGCTG GTCGAGGCGT CCACCCGCTT GGCCCATGAC
CGCGCCGAGA TCGCCGAGCT GCACCAGAAT GCGCTGGAGG CGATTGAGGA GCTGCCGCCG
ACCACCGAAG CCGATGGCCG GCTGGCGGCC GTGCGCGCCG AGATCGAGGC CAAGCGCCGC
GCCGCGGCGC AGGTCCGCGC CGAGGCCCAG GCGCTGGCCC GCGAAGCCGA ACTCGCCGAC
CGCCGCGTCC AGGCGATCAT CACCGAGCGC AACGACTGGT TCAACCGCAT CCGCGGCGCC
GGCTCGCAGA TCGCCACGAT CGAGGCGCGC ATCGCCGAGG TGAAGGACGA GCGTGCCGAG
CTGGAGAATG CGCCGGAGAT CTTTGCCGAG AAGCGCAGTG CCCTGATCGA CGAGCTCGCC
ATCGCCGAGG AAGAGCGCCA GGTCGCGGCC GACGCGCTGG CCGAGGCCGA GACCGCGATG
GGCGACACCG ATCGCGCCGC CAAGGCCTCG CTGGAAGCAT TGTCGAAGGC GCGCGAGGCC
GCCGCCCGCG CCGAGGAGCG GCTGGAAAGC GCCAAGCGTC GCGTCGCCGA TGTCGAGCGC
GAGATCCACG ACATGCTCGA ATGCGAGCCG CAGGCCGTCG CCGCCATGGC CGAGATCGGC
CCGGACACCG AGCTACCGCC GCTGCACGAG ATCGAAGAGA CCCTGGAAAA GCTGCGGCGC
GACCGCGAGC GGCTCGGCGC CGTCAATCTG CGCGCCGAGG AGGAGCTCAC CGAGGTCGAG
GGTTCGCACA CCGCGCTGAC CACCGAGCGC GACGACCTCG TCGAGGCCAT CAAGCGGCTG
CGCCAGGGCA TCCAGAGCCT CAACAAGGAG GCGCGCGAGC GCCTGCAGTC CTCGTTCGAG
ACCGTCAACG ATCACTTCAA GCGTCTCTTC ACCGAGCTGT TCGGCGGCGG CGAGGCGGCG
CTGCACCTGA TCGAGAGCGA CGACCCGCTC GAGGCCGGCC TCGAGATCAT CGCCAAGCCG
CCGGGCAAGA AGCCGCAGAC GCTGTCGCTG CTGTCGGGCG GCGAGCAGGC GCTGACCGCG
ATGGCGCTGA TCTTCGCGGT GTTCTTGACG AACCCATCGC CGATCTGCGT GCTGGACGAG
GTCGACGCGC CGCTCGACGA CCACAACGTC GAACGCTTCT GCAACCTGCT GCATGAGATG
AAGGGCTCGA CCGAGACCCG TTTCATCATC ATCACCCACA ACCCGATCAC CATGGCGCGC
ATGAACCGGC TGTTCGGCGT CACCATGGCG GAGCGCGGCG TGTCGCAGCT CGTCTCGGTC
GCGCTCGACG AGGCCGTGAA GATCCTCGAC CAGCAGGTGG CGTGA
|
|---|
| Protein sequence | MKLTRLRLHG FKTFVEPTDF VIEPGLTGVV GPNGCGKSNL VEALRWAMGE TSHKSLRAAD
MDAVIFSGSN TRPARNHAEV VMTIDNSDRT APAAVNDRDI LEISRRIERE AGSVYRINGR
DVRARDVQIL FADAATGARS PALVHQGKIG EIIQAKPEQR RRVLEDAAGV AGLHARRHEA
ELRLKAAETN LLRVEDVIGQ LSGQMEGLRK QARQAIRYRE VAAKVRKAEA TLYHLRWMGA
HADLNDAARV HDLSVREMAE RTREQAESAR IQAIRSSHLP ALREAEARAA ATMQRLKNAR
DLLDREELRA KERAGELDRR LMQLTADVAR EQQQNQDAQV ALQRLETEDA ELKEEIKARV
EMRSGVDERV AEAEALLAET ERQFTELTTQ LADLTARRNQ LEANVRSHRD RLARLDQDIA
NVRADEERLA QETAHLGDLD TLAAALEAAE EAEAQAEAAV QTNESAQAAA RQKLEASRAP
LAEAEKRAQR LETEARTISK MVNSETKNLW PPIIDGVTVA KGYEKALGAV LGDDLDAPVD
ASAPMHWTVA GAEVTDPALP DGVEPLAAYV QAPPELSRRL AQIGVVSRDR GAQLVSQLRT
GQRLVSPEGD VWRWDGFIAA AHAPTGAARR LAERARLIDI EAELEQARID ATNKRQALES
AEAEVKAATS AESAAREAWR AAQREVNSAR ERHANAEREI NRHSARKSAL VEASTRLAHD
RAEIAELHQN ALEAIEELPP TTEADGRLAA VRAEIEAKRR AAAQVRAEAQ ALAREAELAD
RRVQAIITER NDWFNRIRGA GSQIATIEAR IAEVKDERAE LENAPEIFAE KRSALIDELA
IAEEERQVAA DALAEAETAM GDTDRAAKAS LEALSKAREA AARAEERLES AKRRVADVER
EIHDMLECEP QAVAAMAEIG PDTELPPLHE IEETLEKLRR DRERLGAVNL RAEEELTEVE
GSHTALTTER DDLVEAIKRL RQGIQSLNKE ARERLQSSFE TVNDHFKRLF TELFGGGEAA
LHLIESDDPL EAGLEIIAKP PGKKPQTLSL LSGGEQALTA MALIFAVFLT NPSPICVLDE
VDAPLDDHNV ERFCNLLHEM KGSTETRFII ITHNPITMAR MNRLFGVTMA ERGVSQLVSV
ALDEAVKILD QQVA
|
|---|
| |