Gene BBta_2222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2222 
Symbol 
ID5150238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2297918 
End bp2299003 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content68% 
IMG OID640557151 
Productputative ATP-binding protein of sugar ABC transporter 
Protein accessionYP_001238307 
Protein GI148253722 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.655318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0406235 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCA CGCTCGATCA CGTCTCCCGG GTCGTCGACG GCGTCACGAC CATTCGAGAC 
GTTTCGCTGA CCCTGGAGCG CGGCACGCTG AGCGTGCTGC TCGGCCCGAC TCTGTCCGGC
AAGACTTCGA TCATGCGTTT GCTCGCCGGG CTCGACAAGC CGACCACCGG CCGCGTGCTG
GTCGACGGCA AGGACGTCAC CGGCGCCGAC GTGCGGCAGC GATCGGTCGC GATGGTCTAT
CAGCAGTTCA TCAACTATCC CTCGCTCACG GTGTATGAGA ATATCGCCTC GCCGCTGCGG
GTGCAGGGCA AGCCGCGCGA GGAGATCGAG AAGCGCGTGG CCGAGGCCGC CAGGCTGCTG
CGGCTCGAGC CCTATCTGAA GCGCACCCCG CTGCAGCTCT CCGGCGGCCA GCAGCAGCGC
ACCGCGATCG CGCGCGCGCT GGTGAAGGGC GCCGATCTCG TGCTGCTCGA CGAGCCCCTG
GCCAATCTCG ATTACAAGCT GCGCGAGGAG CTGCGCGCCG AATTGCCGCG CATCTTCGAA
GCGTCGGGGG CGATCTTCGT CTATGCAACC ACCGAGCCGT CGGAGGCGCT GCTGCTGGGC
GGCCGCACCG TGTGCATGTG GGAAGGTCAG GCGCTGCAGG CCGGCGATAC CGCCACCGTC
TACCGCCGTC CGGACACGTT GCGCGTCGGG CAGGTGTTCT CCGATCCGCC GATGAATGTC
GTCGAGATCC AGAAGCGCGG CGACAGCGTG CATTATGCCG GCGGCGTCAG GGCGCCGGCG
GCCGGCCTCT ATGCCGATCT GCCGGAGGGC TCCTATCGCG TCGGCTTCCG GCCGCATCAG
CTCGGACTGG CCAAGGGCGA CGGCAGCCAT GGCCGCCATG CCTTTCCGGC GACCGTCTCG
GTCACCGAGA TCACGGGATC GGAGAGCTTC GTGCATCTGA CCCGCGACGG CATGAACTGG
GTCGCCGTGC TGCACGGCGT CCATGAATAC GAGCCCGGCG AGATTCTCGA TGCCGTGCTC
GATCCCGCCA ATATCTTCGT GTTCGACGCC GGCGACCGCC TGGTCGCGGC ACCTGGCAGC
CTTTAG
 
Protein sequence
MSVTLDHVSR VVDGVTTIRD VSLTLERGTL SVLLGPTLSG KTSIMRLLAG LDKPTTGRVL 
VDGKDVTGAD VRQRSVAMVY QQFINYPSLT VYENIASPLR VQGKPREEIE KRVAEAARLL
RLEPYLKRTP LQLSGGQQQR TAIARALVKG ADLVLLDEPL ANLDYKLREE LRAELPRIFE
ASGAIFVYAT TEPSEALLLG GRTVCMWEGQ ALQAGDTATV YRRPDTLRVG QVFSDPPMNV
VEIQKRGDSV HYAGGVRAPA AGLYADLPEG SYRVGFRPHQ LGLAKGDGSH GRHAFPATVS
VTEITGSESF VHLTRDGMNW VAVLHGVHEY EPGEILDAVL DPANIFVFDA GDRLVAAPGS
L