Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1921 |
Symbol | |
ID | 5149388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 1982652 |
End bp | 1983362 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640556865 |
Product | hypothetical protein |
Protein accession | YP_001238021 |
Protein GI | 148253436 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II [TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTCG CCCAATTCAG GTATCTGACC TTCGATGTGG TCGGCACGCT GATCGACTTC GAAGGCGGGA TCGTCACCAG CCTCGGCGAC ATCGCGGCGG AATCCAGCAA GGTCATCGAT GGTGAGCAGG CGCTCAGCCT GTACCGCGCT GCACGCTACG CCGCCGACGC GGATCGTTTC CCGGATGATC TCGTGCGCGT CTATGACGTC ATTGCACCGC AACTCGGTCT GCCCAGACAG ACCACGCTCG GCGAGCGCTT CCGCGATTCG GCCGCGCGCT GGAAGGCGTT TCCCGACAGC GCCGCGGCCA TGGCCCGCCT CGCCAGTCGC TACAAGCTCA TCGCAATGAC CAATGCGCGG CGTTGGGCGC TGGATCATTT CGAGCGCGAG CTGGGTTCGC CGTTCTACGC GACCTTTACG GTCGACGACA CCGGGACGGA GAAGCCGGAT CCCTGCTTCT TCACCCAGGT ATTCGACTTC GTCGCACGCG ACGGCGGCAC CACCTCGCAG ATCCTGCATG TCGCGCAGAG CCAGTATCAC GACATCGGCA TCTCCCGGCA GCTCGGCATC ACCAATTGCT GGATCGAGCG GCGTCACGAC AAGCAGGGCT ATGGCGGCAC CATCGCGCCC GCGTCCTTCA CGAAGCCGGA TTTTCATTTC CATTCGATGG CCGAACTGGC CGACGCGGTG GACCACGTGC CTGCGACATA A
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Protein sequence | MDLAQFRYLT FDVVGTLIDF EGGIVTSLGD IAAESSKVID GEQALSLYRA ARYAADADRF PDDLVRVYDV IAPQLGLPRQ TTLGERFRDS AARWKAFPDS AAAMARLASR YKLIAMTNAR RWALDHFERE LGSPFYATFT VDDTGTEKPD PCFFTQVFDF VARDGGTTSQ ILHVAQSQYH DIGISRQLGI TNCWIERRHD KQGYGGTIAP ASFTKPDFHF HSMAELADAV DHVPAT
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