Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1560 |
Symbol | |
ID | 5152915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 1643665 |
End bp | 1644285 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640556524 |
Product | transposase |
Protein accession | YP_001237682 |
Protein GI | 148253097 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0744528 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTCTGCT TCGACGAGAG CCAGGTCCAA CTCATCGGCG AGACCCGTCA ACCGATTCCC GCCAAGCCGG GCCGGATCGA GCGTTACGAT TACGAGTACC GACGCAACGG CACGGCCAAC CTGTTCGTGC TCATTGACGT GAACCGGCCC TGGCGCAAGG TGAAGGTGAC GGAACGACGC ACCGCGAAGG ACTTTGCCGA ATGCATGCGC GAGCTTGTCG ACGTGCACTA TCCCAAAGCC GAACGCATTC GCGTTGTGCT CGACAATCTG TCGACCCACA AGGCCGGCGC ACTCTATCAG GCATTCCCGC CCGACGAAGC TCGCCGCCTG CTCCGCCGTC TCGAATTCCA TCACACGCCA AAGCACGCCA GCTGGCTCAA CATGGTCGAG ATCGAAATCG GCGTCCTCTC GCAGCAGTGC CTCGACCGAC GGATCGACAG CCATGCTCGT CTCGTCAGAG AGACCGCAGC CTGGGAAAAA CGCCGCAACG CCGAGCGCTC CAGAATCAAC TGGATGTTTA CGACCGAGAA GGCCAGGGCC AAACTCGGCC GCGCCTATCC AAAAGTCCCG GCTAAACCGA CGAAAAAACA AAGAGTCAAA ACCTCTGTGC AGAGGTACTA G
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Protein sequence | MVCFDESQVQ LIGETRQPIP AKPGRIERYD YEYRRNGTAN LFVLIDVNRP WRKVKVTERR TAKDFAECMR ELVDVHYPKA ERIRVVLDNL STHKAGALYQ AFPPDEARRL LRRLEFHHTP KHASWLNMVE IEIGVLSQQC LDRRIDSHAR LVRETAAWEK RRNAERSRIN WMFTTEKARA KLGRAYPKVP AKPTKKQRVK TSVQRY
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