| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1546 |
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| Symbol | |
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| ID | 5152562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 1626890 |
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| End bp | 1630129 |
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| Gene Length | 3240 bp |
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| Protein Length | 1079 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640556510 |
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| Product | putative cation efflux system protein |
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| Protein accession | YP_001237668 |
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| Protein GI | 148253083 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.161901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.236691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGAAGG GAATCCTCGC ATTTGGCTTG ACCCGGCGCG CCATTATCTT GTTGGGGGTG
CTGGTGTTCA TCTGCGGTGG GCTGATCGCG TTCCGCAACC TGAACATCGA GGCTTATCCC
AATCCCGCGC CGGTCATCCT TGAAATCACC GCGCAGGCGC CGGGTCTGTC GGCCGAGGAA
ATGGAGCGCT ACTACACGAT TCCGATGGAG GTGGGTCTTG CCGTCACACC GGGCGTCGAT
GTCATTCGCT CGACCTCGTT CTATGGCCTC TCGTTCGTGC GAGTCACGTT CAAATACGGG
GTCGAATTCT ATTTCGCCTA CACCCAGGCG GCGCTCAGCC TTCAGCAGCG TGTCAACCTT
CCCAACAACA CGCAGCCCAA TATTCAGCAG TCCAGCCAGG CGGGCGAGAT CCTTCGTTAT
CAACTGGCCG GACCTCCGCA TTTCGGATTG ACCAACCTGC GTACCGTGCA GGATTGGATC
GTACAGCGCC GCCTTCTGAC GGTTCCCGGA GTCGTTCAGG TGAACTCGTG GGGCGGCACG
ACCAAGCAGT ACGACGTCGA AGTCGATCTG CACAAGCTTG ACGCCTACAA CCTCACGCTC
CAGCAAGTCA CGACTGCGCT CAGCAATTCC AATATCAATG TCGGTGGACG CGAGATCGCG
GTCGGACAGC AATCGGTCAA TATTCGGGGC GTTGGTTTGT TTGACAGCGG CGGCGAGAAG
GACCTGACCC AGGGTTACAA GGTCAGCGAT ATTGAGAACG TCGTGTTGAC CCAGATGAAC
GGCGTCCCCG TGCAGGTGAA GGACGTCGCC AAGGTCTCGG TCGGCTTCGT GCCGCGGCTC
GGTATTGCCG GCCGGGACAG CAATGACGAC GTGGTGATGG CCATCGTGGT CATGGGCAGA
ACCTATCATA CGAACGAGGT GTTGCCGCGC GTCGAGGCGG AGATTGCCAA GATGAACAGC
GACGGCACCC TGCCTCCCGG GGTCAAGTTG GTGCCATTCT ATGACCGCGG CACGCTGATC
TCGGTCACCA CCCGCACGGT GCTGCACAAC CTGATCTTTG GCTGCGCACT GGTCTTCTTG
ATTCAGTGGC TGTTCCTCGG TGATCTGCGC AGCGCAATTA TCGTCGGCGT CAATATTCCA
TTCGCGTTGT TTTTCAGTGT CATTGTCCTC GTGCTGCTGG GGCAGGACGC GAATCTGCTG
TCGGTCGGCG CCGTCGACTT CGGGATCATC GTGGACTCCG CCGTGATCCT CGTCGAAAAC
ATCTTCCGGA ACTTCCAGGC AAGCGACAAG CACAAGCAGG AAACTCTGGG CTACCTCTCC
GAAGGTCAGT GGGGTCCGGA TCCAACCCGG CCCAAACCTG GCTCTCCCAA TCTCTGGACC
GATCGGTTAC GGCTGATTCT GGCCAGTGCA TTGCAGGTTG ACAAGGCGGT GTTCTTTTCC
GCTGCGATTA CGGTCGCCGC TTTCGTTCCG CTGTTCACTA TGCAGGGCGT GGAGGGCCAG
ATCTTCAATC CGATGGCCAG AACCTACGGC TATGCGCTGG TCGGAGCGCT GATCTCGACC
TTTACGATTT CGCCGGTGCT GGGCTCTTTC CTGCTGCCCG AACACGTCAC CGAGACAGAA
ACCATCGTCG TGCGTGCCTT GCGGGCGGTG TACGCTCCAG CGCTGCGCTG GGCGCTCGGC
CATCGCAAGC TGGTGGCGTC CCTGGGATTG GCAATGCTGG GTGTGACCGG ATTGCTGATG
ATGCGCCTCG GTAGCGAATT CCTGCCGCAC CTGGAAGAGG GCAATCTCTG GATTCGCGCG
ACCATGCCGC CGACCATCGG CCTGATGTCC GGCGAACCGG TGGCTCACAA GGCACGCGAA
ATTCTGCTAC GTCATCCCGA GATCACCACG GTGGTCACGC AGCACGGACG CCCCGACGAT
GGCAGCGATG CGGCAGGATT CAATAATCTG GAACTCTTTG CGCCGCTCAA GCCGTTTGAC
CAGTGGCCCG CCGGTCTGAC CAAGGACAAG CTGACGAAGC AATTGCAGCA GGAATTCGCC
GACGAGGCTC CGGGGGTCGT TTTCAACTTC TCGCAGTACA TTCAGGACAA TTTCGAGGAG
CAGCTGTCCG GAGTCAAAGG CGCGAACTCG GCCAAGATAG TCGGGCCCGA CCTCGTGACC
CTCGAGGAGC TTGCGCGACA GGTCCGGCAC GAAATGGCCC AGGTCCGGGG CATCGAGGAT
CTCGACGTGT TCTGGGTGCG CGGTCAGCCC AATCTGAACA TCAAGGTCGA TCGGGAGCGG
GCGGCCCGGT ACGGACTCAA TACCGGTGAC GTCAACACCC TGGTCCAGGC GGCGCTTGGA
GGCGCGCATG CGACCGCATT GCTCGAAGCG GACCGTCAGT TCAACGTCGT GGTCCGTCTG
CCGGCGGAGT ACCGGGAAAG CCTTGAGGCG GTTCGCAACA TCAAGGTCGG TATCAACACT
CCGGCAGCAG CAAATGCCTA TATACCTTTG AGCGAGTTGG CCGACATCAC TCTCGATACC
GGCTCATCCT ACATCTATCA CGAGAGTCGC GAGCGCTACA TTCCGGTCAA GTTCAGCGTG
CGAGATCGCG ATCTTGGCGG CGCCGTTGCC GAAGCCCAGG AACGGATCGC GGAGAACGTG
AAGCTGCCGC CGGGCTACCG GGTGTTATGG GCCGGCGAGT TCGAATCGCT GCAGCTCGCC
AAGAAGCGAC TCGAAGTGAT CGTGCCCATC AGCCTGGCGA TGATTCTGGT TCTTCTCTAC
GGGCTCTTCA ATTCGCTGCG CGACAGTCTG CTGGCGCTGG CCGGCATTCC ATTCGCCGTT
GCTGGCGGCA TCATTGCGCT ATACGTGACC GGCCTCGATT TCAGCATCTC GGCGGCGATC
GGGTTCGTCT CGCTATTCGG CGTGTCCGTC ATGGACGGCA TTCTGATGAT CACCTACTAC
AACCAGGCGC GGCAAGGAGT GGCGGACTCT GTCGAAGCGA TGTTCCAGGC CTCAACGCAG
CGGATGCGGC CGATGCTGAT GACGGCAATG TCGGCCTGCA TCGGACTTTT TCCGGCCGCC
CTCTCCGAGG GCATCGGCGC CCAGGTGCAG CGGCCGCTCG CCACCGTGGT CGTGGGTGGC
ATGCTGATCG GGCCGATCAT GCTCCTGGTG GTGGTGCCGG CACTTCGAGT GATGTTGCTT
GGCAGAGAAG GAGAGGCGTC GGGGGCAGGC GATGCCAGTA GCTTCGCACC TGCCGAGTAA
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| Protein sequence | MLKGILAFGL TRRAIILLGV LVFICGGLIA FRNLNIEAYP NPAPVILEIT AQAPGLSAEE
MERYYTIPME VGLAVTPGVD VIRSTSFYGL SFVRVTFKYG VEFYFAYTQA ALSLQQRVNL
PNNTQPNIQQ SSQAGEILRY QLAGPPHFGL TNLRTVQDWI VQRRLLTVPG VVQVNSWGGT
TKQYDVEVDL HKLDAYNLTL QQVTTALSNS NINVGGREIA VGQQSVNIRG VGLFDSGGEK
DLTQGYKVSD IENVVLTQMN GVPVQVKDVA KVSVGFVPRL GIAGRDSNDD VVMAIVVMGR
TYHTNEVLPR VEAEIAKMNS DGTLPPGVKL VPFYDRGTLI SVTTRTVLHN LIFGCALVFL
IQWLFLGDLR SAIIVGVNIP FALFFSVIVL VLLGQDANLL SVGAVDFGII VDSAVILVEN
IFRNFQASDK HKQETLGYLS EGQWGPDPTR PKPGSPNLWT DRLRLILASA LQVDKAVFFS
AAITVAAFVP LFTMQGVEGQ IFNPMARTYG YALVGALIST FTISPVLGSF LLPEHVTETE
TIVVRALRAV YAPALRWALG HRKLVASLGL AMLGVTGLLM MRLGSEFLPH LEEGNLWIRA
TMPPTIGLMS GEPVAHKARE ILLRHPEITT VVTQHGRPDD GSDAAGFNNL ELFAPLKPFD
QWPAGLTKDK LTKQLQQEFA DEAPGVVFNF SQYIQDNFEE QLSGVKGANS AKIVGPDLVT
LEELARQVRH EMAQVRGIED LDVFWVRGQP NLNIKVDRER AARYGLNTGD VNTLVQAALG
GAHATALLEA DRQFNVVVRL PAEYRESLEA VRNIKVGINT PAAANAYIPL SELADITLDT
GSSYIYHESR ERYIPVKFSV RDRDLGGAVA EAQERIAENV KLPPGYRVLW AGEFESLQLA
KKRLEVIVPI SLAMILVLLY GLFNSLRDSL LALAGIPFAV AGGIIALYVT GLDFSISAAI
GFVSLFGVSV MDGILMITYY NQARQGVADS VEAMFQASTQ RMRPMLMTAM SACIGLFPAA
LSEGIGAQVQ RPLATVVVGG MLIGPIMLLV VVPALRVMLL GREGEASGAG DASSFAPAE
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