Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1504 |
Symbol | |
ID | 5151853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 1592087 |
End bp | 1592821 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640556471 |
Product | conjugal transfer protein TrbJ |
Protein accession | YP_001237629 |
Protein GI | 148253044 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.135113 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGCC TGTGTCGTCT TGCCGCCGTC GGCGTCATTG CGGTCACCCT AATCGTTGGC TGCAGGCCTT GTTCGGCGCA GTTGGTTGTG TTCGACCCCA ACAATTATGC GCAGAACGTG CTGACTGCAG CTCGTACCCT GCAACAGGTC AACAACCAGA TCGTGTCGCT GCAAAATCAG GCGCAGATGC TGATCAACCA GGCGAAGAAT TTGGCCACGC TGCCGTTTTC GTCGTTGTTG CAGCTGGAGC AATCGATCCT GCGAACCCAG CAGCTTCTCG CCCAAGCTCA GCGCATCGCC TATGACATCC AGCAGATCGA TCGTGCTTTC TCTACGACCT ATGCGTCCGC ATCATCGAGC GTTTCGGACC AGGCGTTGAT AGCGAACGCG CAAAGCCGTT GGCAGAATGC AATGGCGGGC TTGCAGGATG CTTTGCGGAC ACAAGCCACG GTCGTCGGCA ACCTCGACAC CAACCGCACC GAGATGTCCG CTCTTGTCAC CTCGAGCCAG GGGGCGACCG GCGCGCTGCA AGCGGCCCAG GCCGGCAATC AGCTTTTGGC GCTGCAGGCC CAGCAGCTTG CCGATCTCAC GGCGGTCATC GCGGCTCATT CGCGCGCACA AAACCTGGAG TCCGCGCAGC ATGCGGCCGC CCAGGACCAG GGCAGGGAGC AACTGCGGCG TTTCCTGACC CATGGCGCCG GCTATCAACC CACAACCGTG CAGATGTTTC ACTGA
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Protein sequence | MKRLCRLAAV GVIAVTLIVG CRPCSAQLVV FDPNNYAQNV LTAARTLQQV NNQIVSLQNQ AQMLINQAKN LATLPFSSLL QLEQSILRTQ QLLAQAQRIA YDIQQIDRAF STTYASASSS VSDQALIANA QSRWQNAMAG LQDALRTQAT VVGNLDTNRT EMSALVTSSQ GATGALQAAQ AGNQLLALQA QQLADLTAVI AAHSRAQNLE SAQHAAAQDQ GREQLRRFLT HGAGYQPTTV QMFH
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