| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1281 |
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| Symbol | |
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| ID | 5156098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 1363497 |
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| End bp | 1363961 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640556268 |
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| Product | putative general secretion pathway protein H, GspH |
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| Protein accession | YP_001237427 |
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| Protein GI | 148252842 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR01708] general secretion pathway protein H
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGACG ACAGCCAACG CGGATTTACC CTGCTCGAGA TGGTCTGCGT GCTCGCGATC
GTCGCGCTGC TGGCGTCCGT CGCATGGCCC TATCTGCCGC GGCAGACGTC GCGGCCGCGG
TTGCAGGCCT ACGCGCTGCA GGCGGTGACG CTGCTGAAAT CCGATCGCGC CGCTTCGATG
CGCAACGGCC TGCGGGTCGA TACGCGGCTG GACACGTCGC GCCGGCTGAT CAGCTCCGGC
AGCGGCGGTG CGGCGCTGAA GCTGCCGGAC GACGTCGGTT TCCAGGCGAC CTTGCCGCGC
AGTTGCCAGC AGCGGCCGGT GATGGCGACG ATCAGTTTCT TCCCCGATGG CCTGTCCTGC
GGTGGAGCGA TCACCTTGTC CCGCGCCGAT CTGAGCCTCG AGATCCGGGT GAACTGGCTG
ACGGGGAGGA TCGACATTGT CTCGCGCGCG CTCGCCAATG GCTGA
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| Protein sequence | MSDDSQRGFT LLEMVCVLAI VALLASVAWP YLPRQTSRPR LQAYALQAVT LLKSDRAASM
RNGLRVDTRL DTSRRLISSG SGGAALKLPD DVGFQATLPR SCQQRPVMAT ISFFPDGLSC
GGAITLSRAD LSLEIRVNWL TGRIDIVSRA LANG
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