Gene BBta_1252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1252 
Symbol 
ID5152065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1332309 
End bp1332749 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content60% 
IMG OID640556239 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001237398 
Protein GI148252813 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.244343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0514931 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCC CCGCGGACGC CAGGAAGGAT CAGGACCTCA TCAACATCCT GATGTCCAAC 
GCGCGGACCT CGATTTCCGA TCTTGCGAAG GCGCTCGGCG TGTCCCGGGC GACCGCGCAG
GGGCGATTGG CAAGATTGGA AAAGGACGGA ACAATCGCCG GCTACACTGC GATCCTGGGC
AAGCAGGCGC ATGTGACCTC GATCTCGGCG ATCATCCTGA TCGAGCTGGA GGTCAGGCAG
CAGGGCAACG TCATTGCCGC GCTGCGGAAG AAATCTGAAG TCGTGGACTG CTACACGCTG
AGCGGCCCGT TCGATCTGTT CGTCAAGATC AACTGCGCGA CGTCGGCGCA TCTCGACGAA
ATCATCGACT GGATCGCCGA GATGGATGGT GTTCGACGCA CCACGTCGTC GATTCTTCTC
GCCAGGAAAT TCGAAAGGTG A
 
Protein sequence
MARPADARKD QDLINILMSN ARTSISDLAK ALGVSRATAQ GRLARLEKDG TIAGYTAILG 
KQAHVTSISA IILIELEVRQ QGNVIAALRK KSEVVDCYTL SGPFDLFVKI NCATSAHLDE
IIDWIAEMDG VRRTTSSILL ARKFER