Gene BBta_1104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1104 
Symbol 
ID5152655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1175392 
End bp1176198 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content67% 
IMG OID640556093 
Producthypothetical protein 
Protein accessionYP_001237260 
Protein GI148252675 
COG category[S] Function unknown 
COG ID[COG3904] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.720924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.156334 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGTCCG CTCTGCATCG GCACCTCCAT GCATGGCTCG CCGGCAATCC CGACGAAAGC 
ATCCTGCGCT GGATCTTTCG CGCTGTCCTC GTCGTCAGCA TTGCCGTGCT TGCGGCCGAT
CTCGTCGAGA TCAATCACAC CGGGCTCGGC TCCGACGCAG CATCGCCTCA GCTCGACATC
CAGCCCGAAC AGCCGGAGAC GCCCTCGGTG CTGGCGCCGC TGTTGAAGCG GCTGATGGCG
CTGCCGACCG GCGATCCCGC GCTGGAGCAG CCGCTCAGCC TCGAGCTGCG CGGCGGCGGA
CGGCTCTATG CGACGGGCAC GATCACGCCC GGCAGCGCAC GCGCCTTCAC GGAGGAGGTC
GAACGGCACG GCGAATATAT CAGGACCGTC GTGCTGAACT CGCCGGGCGG CTCGGTCGCG
GATGCGCTTG CGATGGGCCG GCTCATCCGC ACACGCAAAT TCGCGACGGA GATCGAGGCC
GGCAAATATT GCGCCTCATC CTGTCCGCTC GTTTTCGCCG GCGGCATCGA GCGACGCGCC
GGCGAGCGCG CCGTGATCGG CGTGCACCAG ATTGCCGCCG TCCGAACCGC CAGCGCGGCG
CGATCCGGCG ACGACATGAG CCGGGCGCAG AACATCTCGG CACGCTGCCA GCGCCACCTG
GCCGATATGG GCATCGATCT GAAGGTCTGG GTGCATGCGA TGGAAACGCC GCATGACCAG
CTGTTCACGT TCAAGCCCGA CGAGCTCAAA TCGCTCAATC TGGTCACATC CGCGCCAGAA
TCGCGTCCCG AAAAACCACG CACTTAG
 
Protein sequence
MGSALHRHLH AWLAGNPDES ILRWIFRAVL VVSIAVLAAD LVEINHTGLG SDAASPQLDI 
QPEQPETPSV LAPLLKRLMA LPTGDPALEQ PLSLELRGGG RLYATGTITP GSARAFTEEV
ERHGEYIRTV VLNSPGGSVA DALAMGRLIR TRKFATEIEA GKYCASSCPL VFAGGIERRA
GERAVIGVHQ IAAVRTASAA RSGDDMSRAQ NISARCQRHL ADMGIDLKVW VHAMETPHDQ
LFTFKPDELK SLNLVTSAPE SRPEKPRT