Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1091 |
Symbol | |
ID | 5152636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 1164136 |
End bp | 1165830 |
Gene Length | 1695 bp |
Protein Length | 564 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640556079 |
Product | pyoverdine ABC transporter permease/ATP-binding protein |
Protein accession | YP_001237247 |
Protein GI | 148252662 |
COG category | [P] Inorganic ion transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4615] ABC-type siderophore export system, fused ATPase and permease components |
TIGRFAM ID | [TIGR01194] cyclic peptide transporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.737034 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCATGCCG GCAGCCTGCT GCGGCCGTAC TGGAAGTTGG TTCTCTGCGG CCTCGTGCTC GGCCTCATCG GCGGCGCCAG CGTCGCCAGC CTGCTCGCGG TGGTGAACAG CGGGCTCTAT GCCGGCTCCG GCGATGTCGG CAGCCTGGTC GCATCGTTTG CCGGCCTCTG CGTCCTGATC GTGATCGGAT CGGTCGGCTC GGACATCAGC GCCAATGTTG TCGGCCAGCG CATCATCGCC TCGCTGCGCA AGTCGCTGGC CGCCAAGATC CTGATGGCGC CAATCGATCA GTTGGAGTCC TATCGCGCTC ACCGGCTAAT TCCCGTCCTG ACCAAGGACG TCGATGCGAT CAGCGATTTC GCCTTCTATT TCCCGGCCTT CCTGGTCTCC GGCGTCATCG TCGCCGGCTG CCTTGTCTAT CTCGCTGTGC TGTCGTGGCC ATTGTTCCTG ATCGTGGCAG CGTTGATCGC GCTCGGATCG TTTGCGCACT TCCGCGCGCG CCAGCGCGGC CTGTCCGGGT TCAATCTCGC CCGCCAGTAC GAGGACGATC TGCAGAAGCA TTACCGGACG ATCGCCGAGG GCGCCAAGGA GCTGCGTCTG CACCGCCCAC GCCGGCATCA CGTGCATGTC GATCTGATCC AGCGCACCAT CGAGCGGATC AGCGACGTGC AGATCAGCGC CATCAATCTG CTGGTCACCA CACGCGCGCT CGGCACCGTG ATGCTGTTCC TGGTGATCGG GGCTGCGCTC GTGCTGCGGC CGCTGCTGTG GCCGGACAGT CCGCCGTCCG TATCCAGTGG ATTCGTCCTC GTGCTGCTGT TCATGCGCGG ACCGATCGAT CAGCTCATCG GCATGCTGCC GTCGCTCGGG CGCGCGCAGG TCGCGATGCG GCGTATTGCC GAATTGTCCG AGCGTTTCGC AACCGCCGAG CAGGATCTGC TCGACGAGCC GGCGCAGTCC GCCGGCGAAC GGGTCGGCTC GATCGAGCTG CGCGGCGTCT CCTACGCATT CCAGGCGGCT GCCGGAGACA ATCCGTTCGT GCTCGGTCCG ATCGATCTGC GCATCACCTG CGGCGAGATC ATCTTCATCG TCGGCGAGAA CGGCAGCGGC AAGACGACGC TGATCAAGCT GCTGCTGGGG CTCTATGTCC CCCATGAGGG AATGGTGCTG CGTGACGGCG TGCCCGTCGT CAGCGATACG CGGGACGACT ATCGTCAGCT CTTCACCACT GTGTTCTCCG ACTACTATCT GTTCGATACG CTGCTGCAAC CCGGCAGCCA GGCGCCGGAA ATCGCGCAGC GCTATCTCGA TCGGCTGGAG CTCGCCCACA AGGTCTCGGT CGAGAACGGC GCGTTCTCGA CGACGGATCT CTCGACCGGC CAGCGCAAGC GCCTCGCGCT GATCAATGCC TGGATCGAGG GCCGCCCGGT GCTGGTGTTC GACGAATGGG CCGCAGACCA GGATCCGGCG TTCCGTCACG TCTTCTATAC CGAGCTGCTT GCCGACCTGA AGCGGCTCGG CAAGACGATC ATCGTGATCT CGCATGACGA CCGCTACTTC CACTGCGCGG ACCGCATCGT TCGGCTCCGC GATGGACGGG TCGACGAGGC CGCGGCGTTC GTCAACGTCG CGATTGCAGG ACGGGGTGGC GTCACGCCAG CCGTCGAGGG CGTGAGCGAG CCGCTTTGTA ACTAA
|
Protein sequence | MHAGSLLRPY WKLVLCGLVL GLIGGASVAS LLAVVNSGLY AGSGDVGSLV ASFAGLCVLI VIGSVGSDIS ANVVGQRIIA SLRKSLAAKI LMAPIDQLES YRAHRLIPVL TKDVDAISDF AFYFPAFLVS GVIVAGCLVY LAVLSWPLFL IVAALIALGS FAHFRARQRG LSGFNLARQY EDDLQKHYRT IAEGAKELRL HRPRRHHVHV DLIQRTIERI SDVQISAINL LVTTRALGTV MLFLVIGAAL VLRPLLWPDS PPSVSSGFVL VLLFMRGPID QLIGMLPSLG RAQVAMRRIA ELSERFATAE QDLLDEPAQS AGERVGSIEL RGVSYAFQAA AGDNPFVLGP IDLRITCGEI IFIVGENGSG KTTLIKLLLG LYVPHEGMVL RDGVPVVSDT RDDYRQLFTT VFSDYYLFDT LLQPGSQAPE IAQRYLDRLE LAHKVSVENG AFSTTDLSTG QRKRLALINA WIEGRPVLVF DEWAADQDPA FRHVFYTELL ADLKRLGKTI IVISHDDRYF HCADRIVRLR DGRVDEAAAF VNVAIAGRGG VTPAVEGVSE PLCN
|
| |