Gene BBta_0914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0914 
Symbol 
ID5150297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp946162 
End bp947115 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content70% 
IMG OID640555909 
Producttranscriptional regulator 
Protein accessionYP_001237077 
Protein GI148252492 
COG category[K] Transcription 
COG ID[COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.881912 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCGA GCGACAGCGA CAAATCCCGG CTCGACGATG CCGCCCGCGC CGGCTGGCTG 
TATTTCATTG CCGGCCATAC CCAGGACGAG ATCGCGCGGA TGCTGCAGGT GTCGCGCGCC
TCGGCGCAGC GGCTGGTGTC GCTGTGCCTC GCCGAGCGGC TGATCACCTT CCGGCTCGAG
CATCCCATCG CCTCCTGCAT GGCGCTCGCG GGCCGCCTCA AAGATCGCTT CGCGCTGGTG
CATTGCGAGG TGGTGCCGAC CGATCCGGCC GCGCCATCGG GCGCCGCCGG CATCGCCGAG
CGCTGCGCCA ACCTGCTGGA AACCACGTTG CGGACCGAGA CGCCGGTGAT CATCGCGCTC
GGCACCGGCC GGGCGGTGCG TGCCGCTGTC GAGCGCGTCA CGCCGATCGA CCGGCCGGAG
CACCAGATCG TGTCGCTGGT CGGCAATATC CTCGCCGACG GCTCGGCCAG CTTCTTCGAT
ACCGTCGGCC GGCTCGCCGA CCGCACCGGC GCGCGGCATT ATCCGATGCC GCTGCCGTTC
CTGATGGGGT CGGAAGAGGA GCGTGACCGC ATGGTCCGGC TCGATGCCAT CGGCAAGGTC
AAGGCGGTCG CGGATCAGGC CGACCTCAAG CTGGTCGGGA TCGGCCAGAT GGACCAGAAG
GCGCAGATGC ATGTCGACGG CTTCGTCACC CGCGACGAGC TCACCGAGAT GATGCGGCTT
GGCGCGATCG GCGAGATCAC CGGCTGGGCC TATGATGCCA AGGGCAAGCT GATCGATGGC
GGCACCAACC GCCGGCTCAC CAGCATTCCG CCGGAGGTCC CCGCGCGCGC GATGACGATC
GCGGCGGCGG TCGGGCCGGG CAAGATTCCG GCGATCCGGG CAGCGCTGGT CGGGCGGCTG
ATCAACGGCC TGATCACGGA CGAGGCCACG GCCCGCGCCA TCCTGGATGA GTGA
 
Protein sequence
MAASDSDKSR LDDAARAGWL YFIAGHTQDE IARMLQVSRA SAQRLVSLCL AERLITFRLE 
HPIASCMALA GRLKDRFALV HCEVVPTDPA APSGAAGIAE RCANLLETTL RTETPVIIAL
GTGRAVRAAV ERVTPIDRPE HQIVSLVGNI LADGSASFFD TVGRLADRTG ARHYPMPLPF
LMGSEEERDR MVRLDAIGKV KAVADQADLK LVGIGQMDQK AQMHVDGFVT RDELTEMMRL
GAIGEITGWA YDAKGKLIDG GTNRRLTSIP PEVPARAMTI AAAVGPGKIP AIRAALVGRL
INGLITDEAT ARAILDE