| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0410 |
|---|
| Symbol | |
|---|
| ID | 5155638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 413810 |
|---|
| End bp | 415471 |
|---|
| Gene Length | 1662 bp |
|---|
| Protein Length | 553 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640555428 |
|---|
| Product | putative adenylate cyclase |
|---|
| Protein accession | YP_001236602 |
|---|
| Protein GI | 148252017 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.546026 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGCC AGATCGTCTT GAAGCGCAAG ATCGCGGCGA TTCTTGCCGC TGACATTGCC
GGCTATTCAC GTCTGGTCGC CGAGGATGAA GAAGAGACGC TGCGGCGTCT GGCAGCCTAT
CGTGAGGTCG TGGACGACTT CATCGCTCGC GCCGGCGGCC GCATCTTCAA CACCGCCGGA
GATGCGGTGC TCGCGGAGTT TCCGAGCGCT GTCGAGGCCG TGCGCTGCGC GATCGACATC
CAGGAGAGCC TGCGAACCCG GAACAGGGAT TTTCCGCCGA ACCGGCAGAT GAGCTACCGC
ATCGGCATCA CCATCGGCGA TGTCGTCGAG CGCGACGGCG ATCTGCTCGG TGATGGAGTC
AATATCGCGG CCAGGCTGGA GGGCCTCGCC GATGTCGGCG GCATCTGCAT CTCGCGCGCG
GTGCATGAGC AGGTCGCCAA CAAGCTGTCG GTCCAGTTCG CCGACATGGG CGCGCGGGAG
GTGAAGAACA TCCCGACCCC GGTGCACGCC TTTCGGGTTG CGATGCGGCG CGAGGACGGC
ACCTTCGCCG CAACGGTCAC CAAGAAGGCT CGCGCGCTGC GCCTGTTGGG ATGGCTCGCG
CTCACCGCGG TCACGCTGGC CGCGATCGGC GTCGGGACCG CTCTCTATCT GGATTATCGT
GATCCGCCGC CGGCGCAACG CGATGCCGCC AAGGCCGCGG CCGAGGCGCT GGCGCGGCTC
TCGGCGACTC CAGCGTCGCC CGTTTCGTCA TCGTCCAAGC CGCCGGCGTC GCCCGGCGCG
CAGCCCCCGT CCACTCCTGA GCCGCAATCG TCGCCGCAAG CCTCGCCCGT CATCGCCGCC
GAGAGGTTCG CCGCTGATGC GGTGCCCTTC GTCAGCGAGC GCACCCGCAT CGCATTGGCC
CGCGACTATG TCCCCGCTCC AGCTCACAAG GCGTTCGCGA CCACCATCAA TGGCGTCAGC
GCCTACGTCA CAGGGCAGTC AAGCGAAGAG GCCGCCAAGG CGGCCGCGCT CGAACAGTGT
CGCCAGCGTG CCGAGACGTC CAACGGATCG CGCAAATGCG AGCTCTATGC GGTCGGCGAC
AGCGTGGTCT TTCCGCACAG CAAGCCGCCG CTGCCGCCGC TGCCATGGGT CCGGCACGAC
CCCACGACGG AGCGCGCCTT CAGCGCCGCC GAGATGCCGC TGGTGAACGA CAGCGGACGC
GCCAGGCTCG AGGCAAATTA CGCTCCCGGG CGCCGCTCCA AGGCGATCGC GCTTGGACCC
AAGGGACATT TCGTCTTCAG CGTCGGCGCC GACCTGGTCG AAGACGCCGT CAGGCGCAAT
CTCGAATCCT GCGGCGCACA GGCCGGCACA CCCTGCATGA TCGTGGCGCT CGATGACGCC
TTCGTCGTGC CGGTGCCGAC CGTGCTGAAG GCCACCGGCT TCTTCCATGC GACGAGCGCC
CCCGCGATCG CGGCCGACTC CCGCGACGAG GTGGTGCGTC GCCTCGCGGC CTCGCCGTCC
GGCTGGAATG CGGTGGCGGT GGGCACCGCG GGTCATCCCG GCTTCGGCCT GAACGGCGAC
CGCGAGGAGA CCGCGATCGG CGGCGCGCTG GCGGATTGCT CCACGCAGGA CAGCGACTGC
CGTGTCATCG CGATCGGCCC GTTCACGGTC GAGCCGAATT AG
|
|---|
| Protein sequence | MAGQIVLKRK IAAILAADIA GYSRLVAEDE EETLRRLAAY REVVDDFIAR AGGRIFNTAG
DAVLAEFPSA VEAVRCAIDI QESLRTRNRD FPPNRQMSYR IGITIGDVVE RDGDLLGDGV
NIAARLEGLA DVGGICISRA VHEQVANKLS VQFADMGARE VKNIPTPVHA FRVAMRREDG
TFAATVTKKA RALRLLGWLA LTAVTLAAIG VGTALYLDYR DPPPAQRDAA KAAAEALARL
SATPASPVSS SSKPPASPGA QPPSTPEPQS SPQASPVIAA ERFAADAVPF VSERTRIALA
RDYVPAPAHK AFATTINGVS AYVTGQSSEE AAKAAALEQC RQRAETSNGS RKCELYAVGD
SVVFPHSKPP LPPLPWVRHD PTTERAFSAA EMPLVNDSGR ARLEANYAPG RRSKAIALGP
KGHFVFSVGA DLVEDAVRRN LESCGAQAGT PCMIVALDDA FVVPVPTVLK ATGFFHATSA
PAIAADSRDE VVRRLAASPS GWNAVAVGTA GHPGFGLNGD REETAIGGAL ADCSTQDSDC
RVIAIGPFTV EPN
|
|---|
| |