Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0403 |
Symbol | |
ID | 5155647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 407285 |
End bp | 407833 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640555422 |
Product | hypothetical protein |
Protein accession | YP_001236596 |
Protein GI | 148252011 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.746507 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.06763 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCAAAC TGAAGAACCT CTCGGCTGGC AAGATCGCCG GCTCGCGCAC CGCGCTCGCT GTAGCCGTGA CGTTGATCGT CGGCGGCAGT GCCACCGAAG CCTCGGCCCG CTCCAGGCAT CATCATCATC ACGCCCGCCA TCACCACCAC CACATGGCGC GCCAAGCCGC TCAGCCCGCG GCAGACTCCT TTTCGAACGG CTGGTCGTCC AACGGCTCGT CCTGGATGAA CGCCAACGCG TCGGTCACCC CGACCTCTGG CACCGGCCGC ACCTTCTCCG GCATGGCCTC GTATTACGGC AACGAGTCCG GCAGCCGCAC CGCCTCCGGT CAGCGTATGA ACGCCAACGC CATGACCTGC GCCCACCGCT CGCTGCCATT CGGCACCAAG CTGCGCGTGA CCCATGGCGG CCAGAGCGTC ATCGTCACCG TCAATGACCG TGGCCCGTTC ATCCGTGGCC GGGTGCTCGA CCTCTCGACC GGCGCCGCCC GCGCCATCGG CCTGACTCGC GCCGGCGTCG GCCGCGTCAC CGCCGAGGTC GTGTCGTAA
|
Protein sequence | MLKLKNLSAG KIAGSRTALA VAVTLIVGGS ATEASARSRH HHHHARHHHH HMARQAAQPA ADSFSNGWSS NGSSWMNANA SVTPTSGTGR TFSGMASYYG NESGSRTASG QRMNANAMTC AHRSLPFGTK LRVTHGGQSV IVTVNDRGPF IRGRVLDLST GAARAIGLTR AGVGRVTAEV VS
|
| |