Gene BBta_0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0116 
Symbol 
ID5150194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp120817 
End bp121080 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content62% 
IMG OID640555144 
Producthypothetical protein 
Protein accessionYP_001236322 
Protein GI148251737 
COG category[S] Function unknown 
COG ID[COG5568] Uncharacterized small protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.833113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAG TGAATGTTGC GTCTGATTCC CGCGTCTCCC CGGAGGCGCT GGCCACCTTG 
GGTGAAGGTC ACATCGCCTA TGTGAAGCAG ATCCGCTCCG AAGACGTGCC GGGCCTGTTT
CCGCAAGCGC CGCGTATTGC GCCGGGACTG AAGCTGTTCG CCTTGCATGC CGCCGATGGC
ACGCCGATCA TGCTCACCGA CAGCCGCGAA GCGGCGATCG CCAATGCGTG GAGCCATGAG
CTTCAGGCCG TGAGCGTGCA CTAA
 
Protein sequence
MNEVNVASDS RVSPEALATL GEGHIAYVKQ IRSEDVPGLF PQAPRIAPGL KLFALHAADG 
TPIMLTDSRE AAIANAWSHE LQAVSVH