| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0103 |
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| Symbol | rpsA |
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| ID | 5149597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 108117 |
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| End bp | 109826 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640555130 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_001236309 |
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| Protein GI | 148251724 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.503388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.928701 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCGA GTATCTCTGC TAATTCCTAC AATCCCAGTC GCGATGATTT TGCCGCGATG
CTGGATGAGT CCTTCACGAA GGGCAACCTT CAGGAAAGCT CCGTCGTCAA GGGCAAGGTC
GTTGCGATCG AGAAGGACAT GGCCGTCATC GACGTCGGCC TGAAGACCGA AGGCCGCGTG
GCGCTGCGTG AATTTTCCGG TCCCGGCCGC GACAGCGAGC TGAAGGTCGG CGACGAGGTC
GAAGTGTTCC TCGACCGCAT CGAGAACGCG CTCGGCGAAG CCGTGCTGTC GCGCGACAAG
GCCCGCCGCG AAGAGAGCTG GGGCAAGCTC GAGAAGGCGT TCCAGAACAA CGAGAAGGTC
AACGGGGTCA TCTTCAACCA GGTCAAGGGC GGCTTCACCG TCGACCTGGA CGGCGCCGTG
GCGTTCCTGC CGCGCTCGCA GGTCGACATC CGTCCGATCC GCGACGTCGC GCCGCTGATG
AACAATTCGC AGCCGTTCCA GATCCTCAAG ATGGACCGTC GCCGCGGCAA CATCGTCGTG
TCGCGCCGGA CCGTGCTGGA AGAGACCCGC GCCGAGCAGC GCCAGGAGCT GGTGCAGAAC
CTCGAAGAGG GTCAGGTGAT CGACGGCGTC GTCAAGAACA TCACCGATTA CGGTGCGTTC
GTCGACCTCG GCGGCATCGA TGGCCTGCTG CACGTCACCG ACATTGCCTG GCGCCGTGTC
AACCACCCGA CCGAGGTGCT TTCGATCGGT CAGACCGTCA AGGTCAAGAT CATCAAGATC
AACCACGAGA CGCACCGCAT CTCGCTGGGC ATGAAGCAGC TGCTGGACGA TCCGTGGCAG
GGCATCGAGG CGAAGTACCC GCTGCAGGCC CGCTTCCACG GCCGTGTCAC CAACATCACC
GACTACGGCG CGTTCGTCGA GCTCGAGCCG GGCATCGAAG GCCTGATCCA CGTTTCCGAG
ATGTCGTGGA CCAAGAAGAA CATGCACCCC GGCAAGATCG TGTCGACCTC GCAGGAGGTC
GAAGTGCAGG TGCTCGAGGT CGATAGCGTC AAGCGCCGCA TCTCGCTCGG CCTCAAGCAG
ACCATGCGCA ATCCGTGGGA GGTCTTCGTC GAGAAGCACC CGACGGGTTC GGTGGTCGAG
GGCGAGGTCA AGAACAAGAC CGAGTTCGGC CTGTTCCTGG GTCTCGAAGG CGACGTCGAC
GGCATGGTCC ATCTGTCGGA TCTCGACTGG AAGCTGCCGG GCGAGCAGGT CATCGACAAC
TACAAGAAGG GCGACATGGT CAAGGCCGTG GTGCTCGACG TCGATGTGGA GAAGGAGCGC
ATCTCGCTCG GCATCAAGCA GCTCGAAGGC GATCCCTTCG CCGAGCCGGG CGATGTCAAG
AAGGGTGCAG TCGTCACCTG CGAAGTGCTC GACGTCAAGG ACGGCGGCAT CGACGTCAAG
ATCGTCGGCA CCGAGTTCTC GACCTTCATC AAACGCTCCG AGCTGGCGCG CGATCGCAAT
GACCAGCGCT CCGAGCGGTT CGCCGTCGGT GAGAAGGTCG ATGCCCGCGT GATCCAGTTC
GACAAGAAGG CCCGCAAGGT CCAGGTGTCG ATCAAGGCGC TGGAAGTCGC GGAAGAGAAG
GAAGCCATCG CGCAGTACGG CTCGTCCGAT TCGGGCGCCA CGCTGGGCGA CATCCTGGGC
ACCGCGCTCA AGAACCGCGA CGCGAAGTAA
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| Protein sequence | MASSISANSY NPSRDDFAAM LDESFTKGNL QESSVVKGKV VAIEKDMAVI DVGLKTEGRV
ALREFSGPGR DSELKVGDEV EVFLDRIENA LGEAVLSRDK ARREESWGKL EKAFQNNEKV
NGVIFNQVKG GFTVDLDGAV AFLPRSQVDI RPIRDVAPLM NNSQPFQILK MDRRRGNIVV
SRRTVLEETR AEQRQELVQN LEEGQVIDGV VKNITDYGAF VDLGGIDGLL HVTDIAWRRV
NHPTEVLSIG QTVKVKIIKI NHETHRISLG MKQLLDDPWQ GIEAKYPLQA RFHGRVTNIT
DYGAFVELEP GIEGLIHVSE MSWTKKNMHP GKIVSTSQEV EVQVLEVDSV KRRISLGLKQ
TMRNPWEVFV EKHPTGSVVE GEVKNKTEFG LFLGLEGDVD GMVHLSDLDW KLPGEQVIDN
YKKGDMVKAV VLDVDVEKER ISLGIKQLEG DPFAEPGDVK KGAVVTCEVL DVKDGGIDVK
IVGTEFSTFI KRSELARDRN DQRSERFAVG EKVDARVIQF DKKARKVQVS IKALEVAEEK
EAIAQYGSSD SGATLGDILG TALKNRDAK
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