Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BARBAKC583_0085 |
Symbol | rimM |
ID | 4684403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bartonella bacilliformis KC583 |
Kingdom | Bacteria |
Replicon accession | NC_008783 |
Strand | + |
Start bp | 94994 |
End bp | 95569 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639841285 |
Product | 16S rRNA-processing protein RimM |
Protein accession | YP_988423 |
Protein GI | 121602541 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
Num covering plasmid clones | 89 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACATA ACAAAAAAGA ACTTAATAAA GCAGTTTTGC TTGCTGTTAT TAGAGCTGCA CATGGCATAA GGGGAGATGT TGTTGTTAAC TTATTGGGTG CTGAGCCGCA GCGTTTAAAG ACTTATGGGG TTCTTTATGA TGATAAAGGA CGACTTTATG AAATTGTATC CATGCGTGTT CACAAAAATA ACGTGATTGT GCGTTTTAAA GGGGTCGATG ATCGTAGTAC TGCGGAGGCT TTAAAGGGAG TTCAGCTTTA TATTGAGCGA GACCAGTTCG CCGATGATTT GGACACGGAT GAATTTTACC AAATAGATTT AATCGGGCTT CGTGTGTATG ATAATACTAA TCAGCTTCTT GGAGAAGTGA GTGGTTTTTT TAATTTTGGA GCAGGCGATC TGCTTGAAGT GCGTCTCATT TCTCACAAGA CCGAGCTTAT CCCGTTTAGT AAGGCGGCTG TGCCGGAAAT TTGCGTTGCT TCTGGTTTTC TTGTGGTAGA TCCGGTGGCA GCTGGTTTGT TCAGTGATCC TCATTCATTC AATGATTTGG CGTTAAATGA TCTGGAAAAA GGATAA
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Protein sequence | MEHNKKELNK AVLLAVIRAA HGIRGDVVVN LLGAEPQRLK TYGVLYDDKG RLYEIVSMRV HKNNVIVRFK GVDDRSTAEA LKGVQLYIER DQFADDLDTD EFYQIDLIGL RVYDNTNQLL GEVSGFFNFG AGDLLEVRLI SHKTELIPFS KAAVPEICVA SGFLVVDPVA AGLFSDPHSF NDLALNDLEK G
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