| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BARBAKC583_0028 |
|---|
| Symbol | lys1 |
|---|
| ID | 4684214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bartonella bacilliformis KC583 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008783 |
|---|
| Strand | - |
|---|
| Start bp | 32755 |
|---|
| End bp | 33993 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639841228 |
|---|
| Product | saccharopine dehydrogenase |
|---|
| Protein accession | YP_988367 |
|---|
| Protein GI | 121602016 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1748] Saccharopine dehydrogenase and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 71 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA ATGTTCTTAT TATTGGTGCT GGAGGTGTCG CACAAGTTGT TGCTCATAAA
TGTGCTCAAA ATAATGATAT TCTCGGTGAA ATTCACATTG CTTCACGAAC ACCAAAAAAA
TGTGATACAA TCATTGCTTC TATTAAAGAT AAAAAAGCAA TGAAAGTAGA GAATATTATC
AAAGGTTATG CACTGAACGC GCTGGATAGA GAGGAAACTA TAAAGCTCAT CCAAAAAACC
AAATGTGAAA TCGTTATTAA TGTTGGTGCT CCTTTTCTCA ATATGTCTGT TCTTTCAGCG
TGTATTGAAA CCAAATGCGC GTATATTGAT ACCGCAATCC ATGAAGACCC TCTAAAAATT
TGTGAAACAC CACCTTGGTA TGGCAATTAC GAATGGCCAC AACGTGAAAA ATGCGAAAAA
GCTGGTATAA CTGCTATTCT AGGAGCAGGT TTTGACCCTG GTGTTGTGAA TGCTTATGCG
GCATTAGCTC GTGATAATTA TTTCGATACC ATCACTGATA TTGATATTGT TGATATTAAC
GCTGGAAATC ACGGACGTTG GTTTTCTACA AATTTTGATC CAGAAACGAA TTTCCGAGAA
TTTACAGGAT GCGTATGGTC GTGGCAAAAT AAACAATGGG TTGCTAATCA AATGTTTGAA
ATCAGCAACG AATGGGATCT CCCGGTCGTT GGCAAACAAA AAGCCTATAT GACAGGGCAT
GATGAAATTC ATTCATTATC TAAAAATCTT GATGTTCAAA ACATCCGCTT CTGGATGGGA
TTTGGTGAAC GTTACATCAC TGTTTTTACT GTTTTAAAAA ATCTTGGGCT CTTATCTGAA
CAACCCATTA AAACAGCAGA GGGCCAAGAA GTTGTTCCTT TAAAAATTGT CAAAGCTGTT
TTACCAGATC CAGCTTCTTT AGCACCAGAT TACACAGGAA AAACCTGTAT TGGTGATTTT
GTTAAAGGCA AAAAAGATGG AAATCCAAGA GAAGTTTTCA TTTATAATGT CGCAGACCAC
AAAGATGCTT TTAATGAAAC CGGTGCACAA GCAATTTCTT ATACGGCTGG CGTTCCAGCA
GCAGCAGCAG CACTTCTTAT TGCCACCGGC GAATGGGATG TAAAAACGAT GGTCAATGTG
GAAGAATTGC CACCACAGCC TTTTCTTAAA AATCTCGACC AAATGGGCCT ATCAACTTAT
ATAAGAGAAG GAAAAAAGGA TAAAAAATTA CAATTTTAA
|
|---|
| Protein sequence | MKKNVLIIGA GGVAQVVAHK CAQNNDILGE IHIASRTPKK CDTIIASIKD KKAMKVENII
KGYALNALDR EETIKLIQKT KCEIVINVGA PFLNMSVLSA CIETKCAYID TAIHEDPLKI
CETPPWYGNY EWPQREKCEK AGITAILGAG FDPGVVNAYA ALARDNYFDT ITDIDIVDIN
AGNHGRWFST NFDPETNFRE FTGCVWSWQN KQWVANQMFE ISNEWDLPVV GKQKAYMTGH
DEIHSLSKNL DVQNIRFWMG FGERYITVFT VLKNLGLLSE QPIKTAEGQE VVPLKIVKAV
LPDPASLAPD YTGKTCIGDF VKGKKDGNPR EVFIYNVADH KDAFNETGAQ AISYTAGVPA
AAAALLIATG EWDVKTMVNV EELPPQPFLK NLDQMGLSTY IREGKKDKKL QF
|
|---|
| |