| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_03479 |
|---|
| Symbol | ybl169 |
|---|
| ID | 8116270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | + |
|---|
| Start bp | 3714754 |
|---|
| End bp | 3718251 |
|---|
| Gene Length | 3498 bp |
|---|
| Protein Length | 1165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644849650 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003001223 |
|---|
| Protein GI | 251786919 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
|---|
| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR02601] autotransporter-associated beta strand repeat |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.112471 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAGA ATATACGAAT TTTACAATTT CTGGTCAGTA TAATTTATTC TGTGCAGTCT
CATTTTTCTG GTGCGCAAAC AATACAACTG AATGGTAATG GTATACCTAA AAGTATAACC
AGGAGTATTA CAGGTGTTGA TGGAAACGCG GCGCTTAATA TCAGCGTGCC GTATAAAACA
AGTTATACTC AAAATATACT ATCTGTTGAA AGCAGTATTA ACATCAAAGG AGGAACAAGC
AATACATCAA TCGGTGGTGC AGGTGTCTAC GGTGAAAACT TTACGCTAAA TAATAATGGA
AGTGTTTGGG GAGGAGATGG ATATAATGGT GGAATTGCTG TTAGTGGCAA CAAAATATCT
ATAAACAATT ACAGAAATGT ATATGGGGGT AATGGTCTTG GTGGCTCAGG AAGTAGCGGA
GGTGCAGGGT TAAGCGGGGA TGATATTATA GTTGATAATT ACAGAAGTAT ATACGGAGGT
GATGATGTAG GTGGGACAGG TGGTTCCGGT GTAACCGGTA GCAATATTAC AGTGCATAAT
TCCGGAGGAA TATTGGGCGG TAATGGCGTA AACGGTGGTG ATGGTATTAA TGGTAGTAAT
CTTTTCATTA CTAACGACAA CATGATATCT GGAGGATATG GAATAAAACA AGGGGGAGAT
GCTATTTCTG GAAATCAAAT CACTTTGAAT AATAACGGTA TTGTTCAGGG GGGATATGGC
CCCGACGGTG GTTGCTCTGT TTATGGAGAA GATATCCATA TTAATAATCA TGGTAATCTT
TCAGGATTAT ATAATAGCCA AAAAGATGCT TATAATACAT CAATAATTTT TTCTGGCGGG
TATAATTCAT TAGATATTTA TTCAGATTCT GTGATTAATG GTGATATTAA ACTAGCTAGT
ATACCTGTTA ATGGTACAAA TGAATTAATT ATTAAAAACA TCAATAACGC AACAGCAATT
AATGGTGGGC TAATGATTGG GAATGGCTCA TCTGTTTATC TGTCAGGCAA GAACTCCATT
TTTAACGGAA ATATAAGTAT TGATGAAGAC GCATCTATGA ACCTGTCTGT AGGAAATGCT
AATGTTCACG CAAATACTAT TACATTAAAA AGTGATTCAT GGCTTAATAT AGACACATCA
ATTAAGAACT GGACTCAGGA CTATTACACA TTATTGTCGT CAGACACAGG TATCTCGATC
GCTGATAATA GTCACATTGT ACAATACAAT GTATTACTGA CAGAAGGTGC TGAAAGTTAT
GTTTATACGT CTTTAAATGA CGACGATAAC AAACTGATAT CCATGCTGAG ATGGAATAAT
ACAAAAGGCA TGGGATATGG AACCTTTAAT ATAGAAAAAG ATGCCACTCT GAACATAGGC
GTTTCTCTTT CCGATAATCT TTCACCTTTA TTATATGATG GCTGGGACGG CAAAAGTCTG
ACAAAATCAG GTAATGGTAC TCTTATACTT TCTGCAACAA ACAATTATAC AGGAAATACA
GAGGTTAAAT CTGGCGTATT AATTCTTGCT GCACCTGATG CTCTTGGTCG GACTGAGTAT
TTATATTTAT CCCGTGGCGC AGAACTGGAT ATGAATGGGT ATCCTCAGAC AATAAGCAAA
CTACTGACGG CTGCAGGCTC TGTGCTGAAC ATTCATGGCG GAAGCCTGAT ACTGAATAAT
GGAGGAGAAT CTGCAGGTAC TATTGCAGGG GATGGTTCTC TGAACATAAA TGGGGGAATG
CTTGATATAA CGGGTAATAA TCGTAATTTT TCCGGTGTTT TTACCGTGAA TAAGGGGGCT
CATTTGGCTG TATCCACGGC TGATAATCTG GGGACAGCCT TTGTTGATAA CTATGGCACA
TTAACTCTGA ACAGTACATC AGCATGGCAG CTTACCAACA ATATCAGTGG TTATGGTAAT
GTTCGCAAGA CGGGAGCAGG TGCACTGAAC ATTAGCGATA ACGCAAAATG GACCGGGATG
ACAGATATTA TTCAGGGGAC AGTGATACTG GGGAACGCAG ATTCACCGGT GATGCTCGGC
AGTAACCAGG TCATTGTTGA AGAGCAGGGC AAACTCTCCG GGTTTGGGGG CGTTGCAGGA
AATCTGAGCA ATAGTGGTAT AGTCGATCTC ACTACATATA TGCCGGGTAA TATACTGACT
GTCGGAGGGA ATTACACTGG CAGAAATGGA CTTATTCTCC TCCAGACAGA AACAGGTGGT
GACAATTCGA AAACAGATCG TCTGGTGATT AAAGGTAATG CCAGTGGCCG TACCCGTGTC
GCTGTTACTC AGGCCGGTGG TACTGGTGCA GAGACACTTA ATGGGATTGA AGTGATTCAC
GTCAGTGGCA ATGCTGATAA TGCTGAATTC ATTCAGACGG AACGTATTAC AGCCGGAGCT
TATGATTACA TACTGAAACG TGGTCAGGGG ATTAACAGCA CTAACTGGTA TCTGATTAGC
AGAAAAGACA TTCCTGTACC ACAACCTGAA GCTGTACCGG AAAACCATGA TAATAATTTG
CGTCCTGAGG CAGGTAGCTA TGTTGCCAGT ATTGCTGCTG CAAATAATCT GTTTGTAACG
AATCTGTATG AACGACAGGG ACAGGAGTTG TATATCAGCC ACATGACAGG AGAAGAAAAT
GAAGCAGGTA TCTGGATGTA TAATAAAGGA AAACATAATC GCTGGCGTGA CAACAGTAGT
CAGCTGAGAA CCCGGGGGAA TAGCTACGTT GTGTTAATAG GGGGAGATAT AGCTCAGTGG
AGCCTGAATG GTACCGATCG CTGGCATACA GGTATGATGG CTGGCTATGG TCATAATAAT
AACAGTACGA ATGCCCTGAG CACCGGATAC CATTCGGAAG GAAGAATGAA TGGATACACA
GCGGGTCTTT ATGCAACATG GTATGCCAAT GATGAAACAC ACAATGGTTC TTATCTTGAT
AGCTGGCTGC AATACAGCTG GTTTGATAAT CATATAAATG GAGAACGGCT GCCTGCTGAG
TCATGGAAGT CAAAAGGGTT TACGGTATCT CTGGAAGCAG GATATTCATG GAAGGCTGGA
GAGTTTACCG ACAATTACAA GGGAAGTCAT GAATGGTATG TTCAGCCGCA GCTTCAGGTT
GTCCGGATGA ATGTAAAATC AGACAAATAT CATGAAAGTA ACGGAACCAG TATTGAAAAT
ACCGGTAACG GAAATATTCT CACCCGCCTG GGAGCAAGAA CATGGCTTAC CAGCAAAAAC
GGTAAAAATA CGCGGTATGC GGTTCCGTTC AGACCATTTG TGGAGGCACA CTGGTTGCAC
AATAGTCGTG TTTTCGGCAC CAGTATGAAT GGTGTAAGTA TATACCAGGA TGGTGCGCGT
GATATCGGAG AAATAAATGG TGGTGTTGTG GGAATGATAA CACCAGAAGT AGCATTCCGG
GCTGATGCAG GCATTCAACT TGGAGAACAT GGATACCATA ATACATCTGC CATGTTGAGT
GTGGAATATC GTTTCTGA
|
|---|
| Protein sequence | MNKNIRILQF LVSIIYSVQS HFSGAQTIQL NGNGIPKSIT RSITGVDGNA ALNISVPYKT
SYTQNILSVE SSINIKGGTS NTSIGGAGVY GENFTLNNNG SVWGGDGYNG GIAVSGNKIS
INNYRNVYGG NGLGGSGSSG GAGLSGDDII VDNYRSIYGG DDVGGTGGSG VTGSNITVHN
SGGILGGNGV NGGDGINGSN LFITNDNMIS GGYGIKQGGD AISGNQITLN NNGIVQGGYG
PDGGCSVYGE DIHINNHGNL SGLYNSQKDA YNTSIIFSGG YNSLDIYSDS VINGDIKLAS
IPVNGTNELI IKNINNATAI NGGLMIGNGS SVYLSGKNSI FNGNISIDED ASMNLSVGNA
NVHANTITLK SDSWLNIDTS IKNWTQDYYT LLSSDTGISI ADNSHIVQYN VLLTEGAESY
VYTSLNDDDN KLISMLRWNN TKGMGYGTFN IEKDATLNIG VSLSDNLSPL LYDGWDGKSL
TKSGNGTLIL SATNNYTGNT EVKSGVLILA APDALGRTEY LYLSRGAELD MNGYPQTISK
LLTAAGSVLN IHGGSLILNN GGESAGTIAG DGSLNINGGM LDITGNNRNF SGVFTVNKGA
HLAVSTADNL GTAFVDNYGT LTLNSTSAWQ LTNNISGYGN VRKTGAGALN ISDNAKWTGM
TDIIQGTVIL GNADSPVMLG SNQVIVEEQG KLSGFGGVAG NLSNSGIVDL TTYMPGNILT
VGGNYTGRNG LILLQTETGG DNSKTDRLVI KGNASGRTRV AVTQAGGTGA ETLNGIEVIH
VSGNADNAEF IQTERITAGA YDYILKRGQG INSTNWYLIS RKDIPVPQPE AVPENHDNNL
RPEAGSYVAS IAAANNLFVT NLYERQGQEL YISHMTGEEN EAGIWMYNKG KHNRWRDNSS
QLRTRGNSYV VLIGGDIAQW SLNGTDRWHT GMMAGYGHNN NSTNALSTGY HSEGRMNGYT
AGLYATWYAN DETHNGSYLD SWLQYSWFDN HINGERLPAE SWKSKGFTVS LEAGYSWKAG
EFTDNYKGSH EWYVQPQLQV VRMNVKSDKY HESNGTSIEN TGNGNILTRL GARTWLTSKN
GKNTRYAVPF RPFVEAHWLH NSRVFGTSMN GVSIYQDGAR DIGEINGGVV GMITPEVAFR
ADAGIQLGEH GYHNTSAMLS VEYRF
|
|---|
| |