Gene Avin_52130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_52130 
Symbol 
ID7764050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp5326432 
End bp5327598 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content70% 
IMG OID643808029 
Productperiplasmic binding protein 
Protein accessionYP_002802263 
Protein GI226947190 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCATT TCGAAGACGC CTTCGAACGG GCCCACCCCG ACATCCGCCT CAACCTGCTA 
TGGCGCGCCC CGAACGACGC CCTGGGCTAT CTTTCGCAGC CGGATCAGGG CGGCGTGGAC
GTTTACTGGG CCGCGTCGCC GCGAACCTTC GAAAGCCTGC GCCAGGCCGG CGCTTGGCGG
CCGATCGGAA TAGATCGTAC GGGACTGCCC GAACGTGTCG GCACCACCCG GCTGTCCGCC
CCGGACGGCA GCTACCTGGC CACCGAGTTG GCCGGCTACG GTTTCGCCTT GGACCGCCGG
GCCCTGGCCG AACTGGGCGT GGCTCCCCCG GCGGACTGGA GCGACCTGGC CGATCCGCGC
CTGGCCGGGC GCATCGCCCT GCCGGTGCCC AGCGAAGTCG GCTTCGCCCC GGTGATGGTC
GACATCGTCC TGCAGGCCTA CGGCTGGGAG CGAGGCTGGG CCCTGTGGAA CGAGATCGCC
GGGCTGTCCT ATCTGGTACA CCGCGGCTCG ACCTTCGTCA GCGACGAAGT GACCGGGCAA
CGGGCCGCGG TCGGCCTGTC CATCGACTTC TTCGTCACCG GCGCGATCGC CGGCGGCGCG
CCGCTGGAAT TCGCCTACCC ACGGCATGGC GGCCTGAACC CGGCCCACGT GGCCATCACC
GCCGGCTCGA AACAGGTGGA AGCGGCGCAA ACCTTCGTCG CTTTCCTGCT CTCGGAATCC
GGCCAGCGCC TGCTGGCGCA TCCGGATATC CACCGCCTGC CGGTGCGGGA ATCGGTCTAC
CCGCAGTTGC CGGCCGGCTA TCACGACCCG TTCCGGGCCG CGGCCGCCGG CGGCTACGAC
TACGACAACG ATCTGGGCCG CGCGCGCCTG GGCGTGGTCA GCGCCCTGTT CGAGCAGATG
CTGATACGCC AGCACGAGGA ACAGCACGCG CTCTGGACCG CCATCCACCA GCGCGAGGCC
CGCGACGGGC AGCGCCTGAC GGCGATACGC GAGCAGCTTT GCCAGCCGCT GATCGGCGAA
AAGGAAGCCG GCGACCCGCA ATTGCAGGCG TCCTTCCGCC GGGTCGAAGG CGACCGGACG
GCCGCCAACG AGATCGAGGC ACGCTGGGGC GAACAGGCGC AGCAGCGCCG CCGGCAGGTC
CGGCAGCAAC TGGAGTCGCT GGGCTGA
 
Protein sequence
MSHFEDAFER AHPDIRLNLL WRAPNDALGY LSQPDQGGVD VYWAASPRTF ESLRQAGAWR 
PIGIDRTGLP ERVGTTRLSA PDGSYLATEL AGYGFALDRR ALAELGVAPP ADWSDLADPR
LAGRIALPVP SEVGFAPVMV DIVLQAYGWE RGWALWNEIA GLSYLVHRGS TFVSDEVTGQ
RAAVGLSIDF FVTGAIAGGA PLEFAYPRHG GLNPAHVAIT AGSKQVEAAQ TFVAFLLSES
GQRLLAHPDI HRLPVRESVY PQLPAGYHDP FRAAAAGGYD YDNDLGRARL GVVSALFEQM
LIRQHEEQHA LWTAIHQREA RDGQRLTAIR EQLCQPLIGE KEAGDPQLQA SFRRVEGDRT
AANEIEARWG EQAQQRRRQV RQQLESLG