Gene Avin_49900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_49900 
Symbol 
ID7763842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp5056391 
End bp5057524 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content68% 
IMG OID643807822 
Productpermease 
Protein accessionYP_002802056 
Protein GI226946983 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.058462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTTCT CCGGCCGGGG ACGGGGAGGC GCAGCATCCT TGCCCGCTCC CTGCGGGCTT 
GGTGGTGACG GTATGAGCGT GCATTCGCAC GCGTGGGACG AACGCATTTC GCCTGGTATG
GAGGCCGATC CGGGCGGTAT CGTCTGCACG CGCCTTCCGT GCTTTTCCTT CCCGCCCATC
CCGCCAAGGG GGCTCGCCGT GCCGCAGATC CTCTCCATCA CCATGCCCAT CTTCATCCTG
ATCGGGCTCG GCTTCCTCGC CGTCCGCTTC GAGGCGATCG ACAGCGAGCA GATCCGTGGC
CTGGGCCGCT TCGTCATTTC CTTCGCCCTG CCGGCGCTGG TGCTCAAGGC CGTGTCGGAC
AATCCCTTCC TGGAGGTGAT GAACTGGCAA TACCTGCTGG CCTATGGCGG AGGTTCCCTG
GCCGTGTTCC TGCTCGGCCT GCTGTTCGCC CTCAGGCTGC GCCGCGAGCC CCTGGACAGG
GGCGCCATCA CCGCCCTGGG CATGGCCGTT TCCAACAGCG GCTTCGTCGG CTATCCCATC
GTCGCCATGC TGCTCGGTCC GGCAGCGGCC ATCGGTCTGG CGCTGAACAT TCTGGTCGAG
CAGTTGCTGA TCATTCCGCT CAGCCTGGTG CTCGCCGAGG CCGGCCAGCG GCGAGGCGCC
GTCGGCAAGG TGCTGGGCGA GGCGGCCGGG CGCCTGGCCA GGACGCCGCT GATCCTCGCC
ATGCTGGGCG GCCTGCTGTT ATCCCTGCTG GGTGTGCGCC TGCCGGCGAT TCCGGGCAAG
GTGGTGGAAA TGCTCGCTTC GGCCTCGGCG CCGGTGGCGC TGTTCGTGAT CGGCGGTTCG
CTCCGGGGCC TGAAACTGGA CGGCCTGTTC GCTGAGCTGT GGACGATCGC CGCGGGCAAG
CTGATCCTGC ACCCGCTGGC GGTCTTCCTG CTCTTCTCGC TGTTGCCGGA CGTGGACCCG
GCGCTGCGGG TGGCCGGGGT GGTATTCGCC AGCGCGCCGA TGCTGAGCGT CTACACGGTC
CTCGGCCAGC GCTTCGGCGT CGAGGGACGC TGCGCCGCCG CTTTGCTGTT CACCACGCTG
ATGTCCTTTT TCAGCATCAG CCTGCTGAGC GGCATCCTGA AGCCCCACCC GTAG
 
Protein sequence
MPFSGRGRGG AASLPAPCGL GGDGMSVHSH AWDERISPGM EADPGGIVCT RLPCFSFPPI 
PPRGLAVPQI LSITMPIFIL IGLGFLAVRF EAIDSEQIRG LGRFVISFAL PALVLKAVSD
NPFLEVMNWQ YLLAYGGGSL AVFLLGLLFA LRLRREPLDR GAITALGMAV SNSGFVGYPI
VAMLLGPAAA IGLALNILVE QLLIIPLSLV LAEAGQRRGA VGKVLGEAAG RLARTPLILA
MLGGLLLSLL GVRLPAIPGK VVEMLASASA PVALFVIGGS LRGLKLDGLF AELWTIAAGK
LILHPLAVFL LFSLLPDVDP ALRVAGVVFA SAPMLSVYTV LGQRFGVEGR CAAALLFTTL
MSFFSISLLS GILKPHP