Gene Avin_48550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_48550 
Symbol 
ID7763714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4916436 
End bp4917395 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content70% 
IMG OID643807696 
Productpeptidase M23B family protein 
Protein accessionYP_002801931 
Protein GI226946858 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGGAC GCCCGTTACT GTTCGCCGTT TTTCTTGTCT TGGCCGCACC GGCGACGGCC 
GTGACCATCT ACGAGCATGT CGACGCCAAC GGCGTGGTCA GCTATGGCGA CAAGGCCCGT
CCCGGCGCGC GGGTCATCCA CGTCATCCAG CCCGGCCGCG GCCTGCGCGG TCTGCGCGCG
ATTCCGGCCG GCCGGCTGCC GGGGCCGGTG TCGTCGCGCA GCGACGCGCC GGACGACCGG
GTGCGTCTGG ACACCTTCAA GCATGCCGGT GGCCACACCC TGCGGGTGCA GAACGACATG
TTCGCACCGG TGGAGGTCGA GTTGAGCCTG GATGGGCTCG CCAACGTCAG CGGCGCGCCG
AACAGGCCCA TTCGCTGGAT AGTGCCGCCG CGCAGCCAGA TCCGTCTGGC CACCCTGGCG
CCGCGCGATC CGGACCAGCC GATGCGCTAC ACCCCCAAGC TGCGCCATGC CCTGGGCGAC
CCGCGGCTGC GGCCGCAGCC GCACCGCTAT CCGCTGCCCT GGCGCGGCGG TCCGTTCCGC
CTGACCCAGG GCGCCAACGG CCAGTACAGT CATTACACGC CCAAGGGACG CCATGCCGTG
GACATCGCCA TGCCGGTGGG GACGCCGATC GTCGCCGCCC GTAGCGGAGT GGTGGTGCAT
ACGGAGAACG ACCAGCGCGG GCGCAGCCCC AATCCGGGCG GCAACCAGGT GCGCATCCTC
CACGAGGACG GCACCATGGG CGTCTATTTG CACCTGCAGG AGGGCTCGGT GCGGGTGAGC
GAGGGCCAGC GGATCAAGGC CGGCACGCCG ATCGCCCGTT CCGGCAACAC TGGCCGCAGC
ACCGGGCCGC ACCTGCACTT CGTGGTGCAG CGCAATGTCG GTCTGGCGGT GGAGTCGATT
CCCTTCCAGT TCAGCCAGCC GGTCAATGCC CTGCCGAACT TCGCCGTCGG CGGCGATTGA
 
Protein sequence
MLGRPLLFAV FLVLAAPATA VTIYEHVDAN GVVSYGDKAR PGARVIHVIQ PGRGLRGLRA 
IPAGRLPGPV SSRSDAPDDR VRLDTFKHAG GHTLRVQNDM FAPVEVELSL DGLANVSGAP
NRPIRWIVPP RSQIRLATLA PRDPDQPMRY TPKLRHALGD PRLRPQPHRY PLPWRGGPFR
LTQGANGQYS HYTPKGRHAV DIAMPVGTPI VAARSGVVVH TENDQRGRSP NPGGNQVRIL
HEDGTMGVYL HLQEGSVRVS EGQRIKAGTP IARSGNTGRS TGPHLHFVVQ RNVGLAVESI
PFQFSQPVNA LPNFAVGGD