| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_44490 |
|---|
| Symbol | |
|---|
| ID | 7763320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 4501134 |
|---|
| End bp | 4502069 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643807301 |
|---|
| Product | Auxin efflux carrier family protein |
|---|
| Protein accession | YP_002801542 |
|---|
| Protein GI | 226946469 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0679] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTCCG TCCTGGCCGT TCTGCTGCCC ATTTTCGCGT TCATCCTCGC CGGCTTCGTC
TGTCGCCGCA GCAATCGCCT GGGGCCTGGC GCCGCGAGCG AAATGAACAG GTTCGTCGTC
TGGCTCTGTC TTCCCGCCCT GCTGTTCAGG GCTACGGCGA CATCGAGCTG GGAGGCGTTC
TGGCATCCCG GATTCCTGGC GGCCTTCGCC GGAGGGTGCC TGCTGATTTT CCTGGCGACG
CTGCTCTGGC GTCTCTCGCA ACGGCGCTCG CTGCCGGCCG CGAGCGTCGA CGCGCTGAGC
GCTTCCTATG CCAACACGGG CTACATGGGA ATCCCCCTGT GCCTGCCCGT GCTGGGCGAC
GCCGGGCTGG AGCCCGCGCT GATCGCGACC CTGGTGGTGG TCTGCATGCT GTTCGCGATC
GCCGTGATCT GCATCGAGGC CGGCCTGCAG AACGAGAGAG CCCTGGGCCG CGCACTGCTC
AAGGTGCTGA AGGCCCTCGC CGGCAATCCG CTGGTCGTGT CGCCCCTGGC CGGCGTCCTG
TGGGCCGCCA CCGGTCTGGA GGTGCCGGCG ACGATCCTGC GTTTCCTCGA TATGCTCGCC
GCCGCCACCG CCCCGTGCGC CCTGGTGGCG CTCGGGCTGT TCCTGGCGCA GAAACAGGAA
GGCGAGGCGC GGGGCGTCTG GCCGCTGGTG CTCGTGAAGA CGGTCGGCCA GCCGTTGCTG
ACGGGATTCC TGGCCTATCG GGTGCTCCAG TTGCCGGCGC TCTGGGCCAA CGCGGCCTTG
CTGCTGAGCG CGCTGCCCAC GGGGACGGGC CCGTTCATGC TGGCCGAATA CTATGCGCGC
GAGGCTCCCG TGGTTTCCCG CACCATCCTG ATCTCGACGC TGTGCTCGCT GCCGACCCTG
TCGGCCTGCA TCTACTGGAT CAGGAGCGGC GCTTGA
|
|---|
| Protein sequence | MSSVLAVLLP IFAFILAGFV CRRSNRLGPG AASEMNRFVV WLCLPALLFR ATATSSWEAF
WHPGFLAAFA GGCLLIFLAT LLWRLSQRRS LPAASVDALS ASYANTGYMG IPLCLPVLGD
AGLEPALIAT LVVVCMLFAI AVICIEAGLQ NERALGRALL KVLKALAGNP LVVSPLAGVL
WAATGLEVPA TILRFLDMLA AATAPCALVA LGLFLAQKQE GEARGVWPLV LVKTVGQPLL
TGFLAYRVLQ LPALWANAAL LLSALPTGTG PFMLAEYYAR EAPVVSRTIL ISTLCSLPTL
SACIYWIRSG A
|
|---|
| |