| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_42230 |
|---|
| Symbol | |
|---|
| ID | 7763101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 4250667 |
|---|
| End bp | 4251482 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643807076 |
|---|
| Product | 2-hydroxymuconic semialdehyde hydrolase |
|---|
| Protein accession | YP_002801325 |
|---|
| Protein GI | 226946252 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGGCA TAGGCAAGAC CCTGCTCGCA GCGGGGCACC AGACCAACTA CCACGAGGCG
GGGCAGGGCG ATGCGCTGTT CCTGCTGCAC GGCTCGGGTC CCGGCGTTTC CGGCTGGACC
AACTGGGCGA AGAGCATGCC GGTGTTCGCC GACCGCTGGC GGGTGATCGT TCCGGACATC
GCCGGCTTCG GATTCACCGA GTTCAAGGAG GACGCCAAGT ACGACATCAA GCTGTGGGTC
AGCCATCTGG TCGGCATCCT GGATGCGCTG GACATCCCGA AAGCTTCCTT TGTCGGCAAT
TCCTTCGGTG GCGCGCTGGC CATCGGCCTG GCGCTGTTCG CGCCGGAGCG GGTGAACCGG
CTGGTACTGC TCGGCACCCC GGCCGGCGAG TTCGTGCAGA CCGCCGGGCT GCGCGGCGCC
TGGGAGTACG AGCCGTCGCT GGAGAACATG GAAAGGCTCA TGCAGTTGTT CCCCTACGAC
AAGGCGCTGA TCACCCCCGA ACTGGTCAAG AGCCGCTTTG AAGCCAGCGC CCGGCCGGGC
GCGCAGGATG CCCTGCGCAG GCTGATCCCG CAGCCGGCCG CCGAGGGCGA CACCCTGGTC
AAGGGTTTTC CCGCCGCCGC GCTGGCCAAG ATCGCCGCGC CGACCTTGGT GGTGCACGGC
CGCGAGGACC GCGTGGTGCC GCCCGAGTGC GGCCTGCTGA TCGCCAATGC GGTGCCCGAC
GCCGACCTGC ACCTGTTCGG CCGCTGCGGC CACTGGGTGC AGGCCGAACA ACCCCGCCGT
TTCGCCGCGC TGGTGCGCGA TTTCCTTTCG GAGTGA
|
|---|
| Protein sequence | MEGIGKTLLA AGHQTNYHEA GQGDALFLLH GSGPGVSGWT NWAKSMPVFA DRWRVIVPDI
AGFGFTEFKE DAKYDIKLWV SHLVGILDAL DIPKASFVGN SFGGALAIGL ALFAPERVNR
LVLLGTPAGE FVQTAGLRGA WEYEPSLENM ERLMQLFPYD KALITPELVK SRFEASARPG
AQDALRRLIP QPAAEGDTLV KGFPAAALAK IAAPTLVVHG REDRVVPPEC GLLIANAVPD
ADLHLFGRCG HWVQAEQPRR FAALVRDFLS E
|
|---|
| |