Gene Avin_38340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_38340 
Symbol 
ID7762725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3877316 
End bp3878293 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content69% 
IMG OID643806699 
Producthypothetical protein 
Protein accessionYP_002800951 
Protein GI226945878 
COG category[S] Function unknown 
COG ID[COG1300] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.5603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGA ACTCGTTCGA ACATCGCCAC CAGGCCGAAT GGCAAGACTT CGCCCGCCGG 
CTCGACGCCC TCGAACGCGG CAGGCCGGGG GCGGACAGCC GCCACTTCCC CGCCGCCTAC
CGGCGCCTGT GCCGCCACCT GGCCCTGGCC GAGGAGCGCG GCTACAGCAG CCGGCTGGTC
GACCAACTGC AACAACTGGC CCTGCGCGGC CATCGCCAGT TCTACCGGCA CCGCAATCCG
CTGGGCGCAC GCTGCCTCGG TTTCCTGCTC GGCGGTTTTC CGCGCCTGGT ACGCGAAGAG
TGGCGCCCGG TGCTGGCCGC CAGCCTGCTG TTCTACGGTT GCCTGCTCGG CATGGGGCTG
CTGGTCTATC TGTTCCCGGA ACTGGTCTAC AGCCTGCTCG ACCCCGGACA AGTGGCCCAG
ATGGAAGCCA TGTACGATCC CGACGCCAGC CGCCTCGGCC GCTTCGGCGA GCGCAGCTCC
GCAGCCGACT GGATGATGTT CGGTTACTAC GTCATGAACA ACTTCGGCAT CGCCTTCCAG
ACCTTCGCCG GCGGCCTGCT GTTCGGCCTC GGCAGCCTGT TCTTCCTGCT GATCAACGGC
CTGTCCATCG GCGCGGTGGC CGGTCATCTG AGCGACATCG GCTACACCGG CACTTTCTGG
CCCTTCGTGA TCGGCCACGG TGCCTTCGAG CTGACCGCCA TCACCCTCGC CGGCGCCGCC
GGCCTCAAGC TCGGCTGGGC GCTGTGCGCC CCCGGCCGCC TGCGCCGCAG CGAAGCCCTG
CGCCAAGCCG CGGAGCGCAG CGTGCGGCTG GTCGCCGGGG TGCTGTTCCT GCTGCTGATC
GCCGCCTTCG TCGAGGCCTA CTGGTCGTCC ATGACCTTCC CCGGCGCGGC GCTCAAGTAC
ACGGTCGGCA TCCTGCTCTG GCTGCTGGTG GCAGCCTACT TCCTGCTGGC CGGACGCCCT
CGCCATGCGC CTGAGTGA
 
Protein sequence
MKQNSFEHRH QAEWQDFARR LDALERGRPG ADSRHFPAAY RRLCRHLALA EERGYSSRLV 
DQLQQLALRG HRQFYRHRNP LGARCLGFLL GGFPRLVREE WRPVLAASLL FYGCLLGMGL
LVYLFPELVY SLLDPGQVAQ MEAMYDPDAS RLGRFGERSS AADWMMFGYY VMNNFGIAFQ
TFAGGLLFGL GSLFFLLING LSIGAVAGHL SDIGYTGTFW PFVIGHGAFE LTAITLAGAA
GLKLGWALCA PGRLRRSEAL RQAAERSVRL VAGVLFLLLI AAFVEAYWSS MTFPGAALKY
TVGILLWLLV AAYFLLAGRP RHAPE