Gene Avin_34900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_34900 
Symbol 
ID7762385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3560561 
End bp3561595 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content71% 
IMG OID643806356 
ProductMembrane protein 
Protein accessionYP_002800614 
Protein GI226945541 
COG category[I] Lipid transport and metabolism 
COG ID[COG2067] Long-chain fatty acid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.294061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAACCC GTCAGGTTCT GTTCGGGCTC GCCCTGCTCG GTGCCGCTGG CACCGCTTGG 
GCGGATGATT CCAGATTCTC CGTCGCTGCC GGTCGCAGCG CTCCGGTCGC CTCCGGTTCC
GGCGCGGCCG TTCCGCCGGC GGCCAATCCC GTCATGGCCG CCGGAATGGG AATGGCCGTG
GCGAACGGCA GCGGGCAGGG TGCCGGCCGC CTGGTCGCCG AACCCGGACT GCGCGGACTG
ACCCTGCAGC CGACTTTCGC CTACCGGCTC AACGATGCGC TTTCCATCGG TATCGGCGCG
CGCCTCGTCC AGGGCGCTGT GATCCGTCCC GGCGGCGCTC CGGCCGATGC GCCTCCGGCC
TACCTGGATA GCGACACCGG CGCTGGCCTC AATCTGGGCC TGCTGTACCG GGTGAGCGAC
AGCACCTGGC TGGGGCTGGC CTACGCCAGC GGCTACGAAC TGAATCTCGA CGAGCGTGCC
GGCGTCGCCG ATCCCGTGGC GAACGTCGCC CGCGGACGTC CGGAAACCAA CCGGACGATC
GCCGAGGCGC GGGCGCCGGA CAGCGTCACC GCGAGCATTT CCCACCGGCT GGACAGTGGC
TGGATGCTGT CGGCCAGCCT CGGCTGGATG GGCTGGAGCG CCCTGCAACG GTCCGAGGGC
GAGGCGCCGA GCCCGGCTGC CGCGAGCGTC GGTGGCGCAC ACCAGTACCG CGACACCTGG
CGCCTCGCCC TGGGCGCGGA ACAGCAACTC GGCGAGCATC TGCACTGGAG CATGGGGCTG
AGCTACGACT CGTCGCCCTT GCCCGGCGAC CAGCGCAATC TGGACGACCC GTTGCCGGAA
AACCTGCGCC TGGCCGCCGG GCTGAGCTAC CGGATGGATC AGGGGGTGGA GTTGCAGCTC
GGCTACAGCC TGATCTGGCT GGGCGAAGCG GAGTCGCGGC AGAACGGCCG GACGCGCAAC
GACGGCATCC TGTCCGCCGA GCCGCCCAGC AGTACCCTGC ACGTCATCGG CGGGGGCATG
GTCTGGCGTT TCTGA
 
Protein sequence
MPTRQVLFGL ALLGAAGTAW ADDSRFSVAA GRSAPVASGS GAAVPPAANP VMAAGMGMAV 
ANGSGQGAGR LVAEPGLRGL TLQPTFAYRL NDALSIGIGA RLVQGAVIRP GGAPADAPPA
YLDSDTGAGL NLGLLYRVSD STWLGLAYAS GYELNLDERA GVADPVANVA RGRPETNRTI
AEARAPDSVT ASISHRLDSG WMLSASLGWM GWSALQRSEG EAPSPAAASV GGAHQYRDTW
RLALGAEQQL GEHLHWSMGL SYDSSPLPGD QRNLDDPLPE NLRLAAGLSY RMDQGVELQL
GYSLIWLGEA ESRQNGRTRN DGILSAEPPS STLHVIGGGM VWRF