Gene Avin_34370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_34370 
Symbol 
ID7762332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3509452 
End bp3509757 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content60% 
IMG OID643806299 
Productantisigma-factor antagonist STAS domain protein 
Protein accessionYP_002800561 
Protein GI226945488 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATCA CTTCGCAGCC TTCGGCAGAT GGACAAGAGT TGACCATTTT CATCCAGGGG 
CGCTTCGATT TCGGTGCCCA CCAGGAATTC CGGGATGCCT ACGAACGGGT GAACGTCACT
CCGAAGCGTT ATGTCGTCGA CCTGCAGGGG GCGACCTATC TGGACAGCTC GGCGCTCGGA
ATGCTCCTGC TGCTGCGCGA CCATGCCGGC GGCGAGCGGG CGCAGATCCG CCTGATCCAC
TGCAGTCCGG ACGTGCGCAA GATCCTGTCG ATCTCCAACT TCGAACAGCT TTTCCACATC
GCCTAG
 
Protein sequence
MAITSQPSAD GQELTIFIQG RFDFGAHQEF RDAYERVNVT PKRYVVDLQG ATYLDSSALG 
MLLLLRDHAG GERAQIRLIH CSPDVRKILS ISNFEQLFHI A