Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_34040 |
Symbol | |
ID | 7762299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 3477268 |
End bp | 3478563 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643806265 |
Product | OprD family outer membrane porin |
Protein accession | YP_002800529 |
Protein GI | 226945456 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGACAT ATACACCGTG CGGCTGGCGC GCGCTGGCCC TGACTCTGTC AACGGCATCC ATCCAGCCGA CCATGGCCGC TCCGCAGGCC GAGGCGCGGG GATTCGCCGA AGAGGCCGGT GCCCACCTGA TGCTGCGCAA TGGATACGTG TACCGCGACA ACCAGGACGG CGTGCGCGAC CAGTCGCGCT GGGCCCAGGC GTTCATCGCC AGTTTCGACT CCGGTTTCAG CCGCGGTCCC GTCGGCGTCG GCCTGGATGC CTTCGGCCTC CTCGCCGTCC GGCTCGACAC CGGCAAGAGT CGCGACGACG GCGATATCGC CTACTTTCCC ACCGACAGCG ACGGCGACAC CGAAGAGGAT CTGGGCGAAC TCGGGATCGC CTTCAAACTG CGGATTTCCA ATACGCTGCT GCAATACGGC GATCAGCTCC CCGCCCTGCC GGTGCTGTCC TACGACAGCT CCCGCCTGCT GCCGCAGACC TTCCGCGGCG TGCTGCTCAG CAGCGAGGAG ATCGACGGCC TGACCCTGCA CGCCGGGCGC TTCACGGCGC AGAACGACAA CAACCACAGC GGCAGGGACG TTCCGGGACG GGAACTGGAT TCGATCGAAC TCGTCGGCGC CAGCTATGCC TTCAACGAGC GGCTGAGCGT TGCCCTGTAT TTTTCCGATA TCGAGAAGGT GGCCAGAAAG CGTTACGCCA ATATCGTCTG GCAATTGCCG CTCGCCGAAG AAAACACCCT GGAGTTCGAC TTCGATTTCT ACCGGACCCG CTACGACCGG GACTACACCC GGACCGGCAA GGGCGAGGAC AACAGCATCT GGAGCCTGAT GGGCACCTAT CGCCGGGGGC CTCATGCCTT CATCCTCGCC TGGCAGCGCT CGATCGGCGG CTTCGAGAAT CTCGACGAGG ACGGCCAGCC GGTCACCCAC GGCTACGACT TCGATTTCGG CGACGGCGGC GACGCCAATT ACCTGGCCAA CGCCTTCTAT TCCGACTTCA ACCGCAAGGA CGAACGCTCC TGGCAGATCG GCTACGAACT GGACTTCGCC GATCTGGGCA TGCCGGGCCT GACCTGGAGA ACCGCCTATG TCCATGGCAG CAAGATCGAC ACCGGCCGGG ACGGCACGGC GAGCGAGCGG GAGTTCTACA ACCAGATCCA GTACGTGGTG CCGGAAGGCG TGGCCAAGGA CCTGTCGATC AGCCTGTACG GCTCGATCTA TCGGGCCAGC CGCGACCTGA ACCAGGACCT GAACGAGATC TGGCTGTTCG TCGACTACCC GCTCGACTAT CCCTGA
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Protein sequence | MSTYTPCGWR ALALTLSTAS IQPTMAAPQA EARGFAEEAG AHLMLRNGYV YRDNQDGVRD QSRWAQAFIA SFDSGFSRGP VGVGLDAFGL LAVRLDTGKS RDDGDIAYFP TDSDGDTEED LGELGIAFKL RISNTLLQYG DQLPALPVLS YDSSRLLPQT FRGVLLSSEE IDGLTLHAGR FTAQNDNNHS GRDVPGRELD SIELVGASYA FNERLSVALY FSDIEKVARK RYANIVWQLP LAEENTLEFD FDFYRTRYDR DYTRTGKGED NSIWSLMGTY RRGPHAFILA WQRSIGGFEN LDEDGQPVTH GYDFDFGDGG DANYLANAFY SDFNRKDERS WQIGYELDFA DLGMPGLTWR TAYVHGSKID TGRDGTASER EFYNQIQYVV PEGVAKDLSI SLYGSIYRAS RDLNQDLNEI WLFVDYPLDY P
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