Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_29680 |
Symbol | |
ID | 7761869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 3067554 |
End bp | 3069167 |
Gene Length | 1614 bp |
Protein Length | 537 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643805841 |
Product | ABC transporter, ATP binding component |
Protein accession | YP_002800109 |
Protein GI | 226945036 |
COG category | [R] General function prediction only |
COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0246021 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGATT CGCAGAACCT CATCGAGATC CGCGACCTCG CGGTCGAGTT CGTCGGCGGC GATCGCCTGG AGCGCGTGGT GGAAGGCGTC AGCTTCGACA TCCGGCGGGG CGAGACCCTG GCCCTAGTCG GCGAAAGCGG TTCGGGCAAG TCGGTCACTG CTCACTCGAT CCTGCGTCTG CTGCCCTATC CGCTCGCCCG CCATCCGTCC GGCAGCATCC GCTATGCCGG CCAGGACCTG CTCCAGCTCG ACGAGCGCAG GCTGCGCGGC ATCCGCGGCA ACCGCATCGC CATGGTCTTC CAGGAGCCGA TGACCTCGCT GAACCCGCTG CACAGCATCG AGAAGCAGAT CAACGAGGTT CTCGCCCTAC ACAAGGGCCT GCGCGGCGCG GCAGCCACCG CGCGCACCCT GGAGCTGCTC GAACTGGTCG GCATTCCCGA GCCGCACAAG CGCCTCAAGG CTTATCCCCA CGAGCTTTCC GGCGGCCAGC GGCAACGGGT GATGATCGCC ATGGCGCTGG CCAACGAACC CGAACTGCTG ATCGCCGACG AGCCGACCAC GGCGCTGGAC GTCACCGTGC AGTTGAAGAT CCTCGAGCTG CTCAAGGACC TGCAGGCCCG CCTGGGCATG GCCTTGCTGC TGATCACCCA CGACCTCAAC CTGGTGCGGC GCACCGCCCA TCGGATCTGT GTCATGCGCG GCGGGCGCAT CGTCGAACAG GCCGGCTGCG AGGAAATCTT CCACGCGCCG AAGCATCCCT ATACTCAGGA ATTGCTCGGT GCCGAACCCA GCGGGGCGCC GGCGGACAAC CCGGTCGGCG AGCCGCTGCT GGAGGTCGAG GACCTGCGCG TCTGGTTCCC GATCAAGAAG GGCCTGCTGC GCCGTACCGT CGATCACGTC AAGGCGGTGG ACGGCATCGG CTTCAGCCTG CGCCGCGGGC AGACCCTGGG CATCGTCGGG GAAAGCGGTT CCGGCAAGTC CACCCTCGGC CTGGCGATCC TGCGCCTGCT CGCCAGCCAG GGCTCGATCC GCTTCCGCGG CCAGACGCTG GACGGTCTGT CGCAAGGCGA GATCCGCCCC CTGCGACGGG AGATGCAGGT GGTCTTCCAG GATCCCTTCG GCAGCCTCAG CCCGCGCATG TCGGTGGGCC AGATCGTCGG CGAGGGCCTG CGCATCCACC GCCTCGGCAC GCTGGCCGAA CAGGAGCAGG CGATCGTCGA GGCGCTGCGC GAGGTCGGCC TGGACCCGGA AACCCGCCAC CGCTACCCGC ACGAGTTTTC CGGCGGACAG CGGCAGCGGA TCGCCATCGC CCGGGCGCTG GTGCTGAAGC CGGCGCTGAT CCTGCTGGAC GAGCCCACTT CCGCGCTCGA CCGCACGGTA CAGCGCCAGG TCGTCGAGCT GCTGCGCTCG CTGCAGCGCA AGTACGACCT GACCTACCTG TTCATCAGCC ACGACCTGGC GGTGGTCAAG GCGCTCAGCC ACCAGTTGAT GGTGGTCAGG CAGGGACAGG TGGTCGAACA GGGGGCGGCG CGGGATATCT TCGCCGCTCC GCGACATACT TATACACGGC AGTTGCTGGA AGCCGCCTTC CTGGCTCCCG GCAGCGCCGA TTAA
|
Protein sequence | MNDSQNLIEI RDLAVEFVGG DRLERVVEGV SFDIRRGETL ALVGESGSGK SVTAHSILRL LPYPLARHPS GSIRYAGQDL LQLDERRLRG IRGNRIAMVF QEPMTSLNPL HSIEKQINEV LALHKGLRGA AATARTLELL ELVGIPEPHK RLKAYPHELS GGQRQRVMIA MALANEPELL IADEPTTALD VTVQLKILEL LKDLQARLGM ALLLITHDLN LVRRTAHRIC VMRGGRIVEQ AGCEEIFHAP KHPYTQELLG AEPSGAPADN PVGEPLLEVE DLRVWFPIKK GLLRRTVDHV KAVDGIGFSL RRGQTLGIVG ESGSGKSTLG LAILRLLASQ GSIRFRGQTL DGLSQGEIRP LRREMQVVFQ DPFGSLSPRM SVGQIVGEGL RIHRLGTLAE QEQAIVEALR EVGLDPETRH RYPHEFSGGQ RQRIAIARAL VLKPALILLD EPTSALDRTV QRQVVELLRS LQRKYDLTYL FISHDLAVVK ALSHQLMVVR QGQVVEQGAA RDIFAAPRHT YTRQLLEAAF LAPGSAD
|
| |