| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_29100 |
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| Symbol | |
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| ID | 7761813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 3001830 |
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| End bp | 3003674 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643805786 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_002800054 |
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| Protein GI | 226944981 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0223781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATCG CAATGCGCAA GGCCGCAGCT GCCTTCTGGT TGCCCGTGCT GCTGGGCGGC
GTGCTGCTGT CCGGCTGCGC CGGGCAGCCC GCCAAGGAAG GCATCGCCCT GATCGACCAG
GGCCGCTATG AGGAAGGGCT GGTGCAACTG GCCGAGGCCG CGCATCGGGC GCCGGACGAC
ACCGGCGTGC AGATCGCCCT GGCCACCCAG CGCGCGCTGG CGGTCTCCAG GTTGCTGGGC
CAGGCCGAAA AGGCGCGCGT CGCGCGCGAC AACGAGGCCG CACAGGTCGC CTTCCAGCGA
GTGCTGGCCA TCGAGCCGGG CAATGCCCGG GCCGCCGAAG GCATGCGCCA GATCGTTCAG
TTGCGCAACG TCGCCGAGCA TTACCGCCAG GCCGGGCTGG CCCTGAGCCG CGGCGACCTC
GCCGGGGCCG AGCGGCTGGT GCGCTCGATC CTCGCCCTGG AGCCGCAGCA CGAGGGCGCG
CTGGCCCTGC AGGCGGGCAT CGAGGGCACC CGCGCGCAGA CCGCCGTCGC CTATCCGCAG
CTGCGCTCCA GGCTGCAGCA GCCGGTGAGC CTGGAGTTCC GCGAGGCCAA CCTGAAGCTG
GTGTTCGAGG TGCTGGCGCA GACCGCGGGA ATGAACTTCA TCTTCGACCA GGATGTGAGC
CCGGACCTCA AGGCGACCAT CTACGTGCGC CAGGTGCCCA TCGAGGAGGC GGTGGACCTG
CTGCTGCAGC AGGGCCAGTT GAAGCACAAG GTGGTCAACG AAAACACCGT GCTGATCTAT
CCGAACACCC CGCAGAAGCT CAAGGACTAC CAGGAACTGG TGCTGAAGAC CTTCTACCTG
ACCAACATCG ACGCCAATAC CGCGCTGAAC ATGGTCAAGA CCCTGCTCAA GACCCGCGAC
GTGTTCGTCG ACGAGCGCCT CAACACCCTG ACCATGCGCG ACACACCGGA CGCGGTGCAC
CTGGCCGAGC GGCTGTTCCT GGCCCAGGAC CAGGCCAATC CCGAGGTGGT GCTGGAACTG
GAGGTGATGG AGGTGTCGCG CAAGCGCATC CTCGACCTCG GCCTGCAGTG GCCGAACACC
TTCGGCATCC TCGCCGAGGA TGGCACCAGC GCGGTGAGCA TTCTCGGCCA GTTGCGCGGC
ATCGATTCCG ACCGCATCAA CTTCTCGCCG TCGCCGACGC TGAAAATCAA CGCCAACGAC
AGCGACGTCA ACACCCTCGC CAGCCCGGTG CTGCGGGTGA GCAACCGCGA GCAGGCGCGC
ATCCACATCG GCGAACGGGT GCCGGTGGTC AGCGCCACCT CGACGCCCTC GACCCAGGGG
CCGGTGATCA CCGAGAACAT CACCTACCTG GACGTGGGCC TGAAACTGGA AGTCGAGCCG
ACCATCCACC TGAACGACGA GGTGGCCATC AAGGTGGGGC TGGAAGTGAG CAACGCCACC
CAGTTGACGC GCACGGAGGC GGGGACCATC CCGATCCAGG TCGATACCCG CAACGCGGTC
ACCACCCTGC GCCTGCGCAA CGGCGAAACC CAGGTGCTGG CCGGCCTGAT GCGCAACGAT
CAGGGCAAGT CGGGCGACCG CATCCCCGGA CTGGGCGATA TCCCCGGCAT CGGCCGGCTG
TTCGGCAGCA ACAAGGACAC CCTGAGCAAG TCCGAGCTGG TGCTCTCGAT CACCCCGCGC
ATCGTGCGCA ACCTGCCGTA CCAGAATCCC TACGACATGG AATTCGAGTC CGGCACCGAG
AGCAGTCTGC GCCTGCGTCC GGCCGCACTG CCGCGCAAGG CCGGGGCCGC TCTGCGCGGT
CAGGCTTCCG AGCCGCTGGC CGCCGCCGGG CTGGAGCGGC CATGA
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| Protein sequence | MTIAMRKAAA AFWLPVLLGG VLLSGCAGQP AKEGIALIDQ GRYEEGLVQL AEAAHRAPDD
TGVQIALATQ RALAVSRLLG QAEKARVARD NEAAQVAFQR VLAIEPGNAR AAEGMRQIVQ
LRNVAEHYRQ AGLALSRGDL AGAERLVRSI LALEPQHEGA LALQAGIEGT RAQTAVAYPQ
LRSRLQQPVS LEFREANLKL VFEVLAQTAG MNFIFDQDVS PDLKATIYVR QVPIEEAVDL
LLQQGQLKHK VVNENTVLIY PNTPQKLKDY QELVLKTFYL TNIDANTALN MVKTLLKTRD
VFVDERLNTL TMRDTPDAVH LAERLFLAQD QANPEVVLEL EVMEVSRKRI LDLGLQWPNT
FGILAEDGTS AVSILGQLRG IDSDRINFSP SPTLKINAND SDVNTLASPV LRVSNREQAR
IHIGERVPVV SATSTPSTQG PVITENITYL DVGLKLEVEP TIHLNDEVAI KVGLEVSNAT
QLTRTEAGTI PIQVDTRNAV TTLRLRNGET QVLAGLMRND QGKSGDRIPG LGDIPGIGRL
FGSNKDTLSK SELVLSITPR IVRNLPYQNP YDMEFESGTE SSLRLRPAAL PRKAGAALRG
QASEPLAAAG LERP
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