Gene Avin_27180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_27180 
SymbolfumC 
ID7761625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2787880 
End bp2789256 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content63% 
IMG OID643805594 
Productfumarate hydratase 
Protein accessionYP_002799867 
Protein GI226944794 
COG category[C] Energy production and conversion 
COG ID[COG0114] Fumarase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00136432 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAACC ACAGGATCGA ACGCGACAGC ATGGGCGAAT TGGCTGTTCC GGCCGAAGCG 
CTTTACGGTG CGCAGACTCA GCGTGCCGTG AACAATTTCC CGGTATCCGG CCAGCGGATG
CCGGCGGCGT TCGTGAGGGC GCTCATCCTC GCCAAGGCTG CGGCAGCGCG AGCCAACGTC
GAGTTGGGAC AGCTCGCTCC GGAGTTGGGC GACGCCATCG CCGCTGCCTG CCGGCAATTG
CTGGAGGGCG ATTTCATGCA GCACTTCCCC GTGGACGTGT TCCAGACCGG CTCCGGCACC
AGCACCAACA TGAATGCCAA CGAGGTGATC GCCACGCTGG CGAGCCGTAT TCTCGGCGAC
AAGGTCAGCC CGAACGACCA CGTCAACTGC GGTCAGAGCA GCAACGACAT CATCCCGTCG
ACCATCCATG TGAGTGCGGC CATCGAACTG AGCGAGCGCC TGCTGCCGGC CTTGGAACAT
CTGTCGAAGG CGATAGGCGA GAAATCCCGG GAAGTACACC CCTTCGTGAA GACCGGCCGA
ACCCATTTGA TGGATGCCAT GCCGGTGCGC ATGAGCCAGG TGCTGGATGG CTGGGCGCAC
CAGATTCGGT CGAACATCGA GCACCTGACA AGCCTGCAAC CGAGCCTGCA TGCCCTGGCG
CAGGGCGGGA CCGCGGTGGG AACCGGGATC AATGCGCACC CGCGCTTCTC CGAGTGCTTC
TGTACCGAAC TCAAGGCTCT GACCGGGCTC TCGTTCACAC CGGGAGACAA CCTTTTCGCC
CTGATCGGTT CCCAGGACAC CGCGGTCGCC CTGTCGGGCC AACTGAAGAC CACCGCCGTG
TCGCTGATGA AGATCGCCAA CGATCTGCGC TGGATGAACT CCGGTCCCCT GGCCGGCCTC
GCCGAGATCG AGCTGGAAGC CCTGCAACCC GGCTCCTCGA TCATGCCGGG CAAGGTCAAC
CCGGTGATTC CCGAAGCCAC GGCGATGGTC GCGGCGCAGG TGATCGGCAA CGATGCGACC
ATCGCTGTCG CCGGTCAATC CGGCAACTTC GAGTTGAATG TGATGCTGCC GGTCATCGCG
CAAAACCTGT TGCACAGCAT TCAGTTGCTC GGCAACGTCA GCCACTTGCT GGCCGACCGG
GCCATCGCGA CCTTCAAGGT CAATCAGCCG AAACTCAAGG AGGCGCTGGA TCGCAACCCG
ATCCTGGTCA CGGCCCTGAA CCCGCTGATC GGTTACCTGA AAGCGGCGGA AATCGCCAAG
CTGGCCTACA AGGAGGGTCG GCCGATCATC GAGGTGGCAC TCGAACACAC CGAGTTCAAA
CGCGAGGAGC TGGAACAACT GCTCGATCCG GAGAAACTCA CCGAAGGCGG GCTTTGA
 
Protein sequence
MSNHRIERDS MGELAVPAEA LYGAQTQRAV NNFPVSGQRM PAAFVRALIL AKAAAARANV 
ELGQLAPELG DAIAAACRQL LEGDFMQHFP VDVFQTGSGT STNMNANEVI ATLASRILGD
KVSPNDHVNC GQSSNDIIPS TIHVSAAIEL SERLLPALEH LSKAIGEKSR EVHPFVKTGR
THLMDAMPVR MSQVLDGWAH QIRSNIEHLT SLQPSLHALA QGGTAVGTGI NAHPRFSECF
CTELKALTGL SFTPGDNLFA LIGSQDTAVA LSGQLKTTAV SLMKIANDLR WMNSGPLAGL
AEIELEALQP GSSIMPGKVN PVIPEATAMV AAQVIGNDAT IAVAGQSGNF ELNVMLPVIA
QNLLHSIQLL GNVSHLLADR AIATFKVNQP KLKEALDRNP ILVTALNPLI GYLKAAEIAK
LAYKEGRPII EVALEHTEFK REELEQLLDP EKLTEGGL