Gene Avin_25360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_25360 
Symbol 
ID7761449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2541933 
End bp2542673 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content64% 
IMG OID643805420 
ProductResponse regulator, LuxR family 
Protein accessionYP_002799693 
Protein GI226944620 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGGAT TTCCCGGAAA GTCGGCGTGC AACGACAACA ACAGGAGAAT CTCGATGGAG 
CAGGTGGTGT ACGTCGTGGA CGACGACCAA GGCATGCTGG ACTCGACTGT CTGGCTGCTC
GAATCGGTAG GGCTCAAGGC CCTGCCGTTC ATCAGTGGTC GGGCGTTTCT CGATGCCTGC
GACCCCAACC TCAACGCCTG CGTGCTGCTG GATGTGCGGA TGCCGGGCAT GGGCGGCCTG
AACGTGCAGG AGGCGATGCG CGCTCGGGGC ATCGACCTGC CGGTGATCTT CGTCAGCGGA
CATGCCGACG TGCCCATCGT GGTGCGGGCT TTCAAGGCCG GCGCCTGCGA CTTCATAGAG
AAACCCTACA ACGAACAGAT GCTCCTCGAC AGCGTGCAAC AGGCGCTCGG CCGCCATGGT
GAGCGCCGCT CCGGCAGTAG AGGGCAGGAG GCGGTACAGG CGCGGCTGGA TGCGCTGACC
CCGCGCGAAC GCGATGTGCT GCTACCGCTG GTGCAGGGTT ACACCAACCG AGAGATCGCC
GAGCAACTGG AAATCAGCGT AAAGACGGTC GATCTGTACC GGATGCGGGT GATGAAGCGC
ATGCAGGCTG AGCGCCATGC CGATCTGGTC GGCATGGCCA TCGCCGCTGG ACTGGTCGAT
CCGTTGAACC TGCGAGCATC GGCGACCGTG AGCTGCCAGC CGGGGAGGGC GCGGCTCTCG
CTCGACGAGG CCGGTCACTG A
 
Protein sequence
MPGFPGKSAC NDNNRRISME QVVYVVDDDQ GMLDSTVWLL ESVGLKALPF ISGRAFLDAC 
DPNLNACVLL DVRMPGMGGL NVQEAMRARG IDLPVIFVSG HADVPIVVRA FKAGACDFIE
KPYNEQMLLD SVQQALGRHG ERRSGSRGQE AVQARLDALT PRERDVLLPL VQGYTNREIA
EQLEISVKTV DLYRMRVMKR MQAERHADLV GMAIAAGLVD PLNLRASATV SCQPGRARLS
LDEAGH