Gene Avin_22880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_22880 
SymbolexeA 
ID7761206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2282269 
End bp2283981 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content72% 
IMG OID643805173 
ProductGeneral secretion pathway protein A 
Protein accessionYP_002799454 
Protein GI226944381 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3267] Type II secretory pathway, component ExeA (predicted ATPase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.499914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACAACC AGTATTTCGG CTTTTCCGAG GCCCCCTTTT CCATCTCGCC CGATCCGCGC 
TACCTGTTCA TGAGCGAACG GCATCGCGAG GCGCTCGCCC ACCTGCTCTA CGGTCTGCAG
ATCGACGGCG GCTTCGTGCT GCTCACCGGC GAGGTCGGCA CCGGCAAGAC CACCCTCTGC
CGCCGCCTGC TCGGCCAGGT GCCGGAACAC TGCGACGTCG CCTTCATCTT CAACCCCAGG
CTGTCGCGCC TGGAACTGCT CGAAACCCTC TGCGAGGAAC TGGGCATCGC CCTGCCGGAC
AGGGTGCGCA GCCTCAAGCC CCTGTTCGAC CGGATCAACG CCCACCTGCT GGAGAGCAAC
GCCCGCGGCC GCAAGACGGT ACTGATCATC GACGAGGCGC AGAACCTGTC GGCCGAGGTG
CTGGAGCTGC TGCGCCTGTT GACCAATCTG GAAACCGACC GGCACAAGCT GCTGCAGATC
ATCCTGCTCG GCCAGACCGA GCTGCGTGAT CTCGTCGCCC GCGACGACAT GCGCCAGCTC
GCCCAGCGCA TCGTCGCCCG CTATCACCTG GAACCGCTGT CGGGCCCGGA AGTCGGCGCC
TATGTCCGCC ATCGCCTGGC GGTCGCCGGC AGCCGCGCCG AACTCTTCGC GCCGCCGCTG
CTGGAACGCC TCTACCGGCT GAGCGGCGGC ACGCCGCGGC TGATCAACGT GCTCTGCGAC
CGCGCCCTGC TCGGCGCCTG CGTGCAGGGC AAGGCCGGTG TGGACCGGGC GACCCTGGAC
AAGGCCGCCC GCGAGGTGCT CGGCCCGGCG CGGCGAGCGA GGCCTCCCGC GGCCCTGGCC
GCGATCCTCG GCATCGGCCT GCTCGCCGGC ATGGCCACGG CCGGCTGGCA TCTGGCGCCG
GAACCTTCGG CGGATGCCGG CCATGGCGGA CCGGCCAGGC TGCTCGCCGC CGCACCGACC
GAGAGCATGC CTGCACCTGC TCCACCGAGC GGCGATGACG ACACCGGACC CCTGCCCGCG
TCCGGCCTGC CACGGCAGGA AGGCGTCCAG CCCCTAGAGC CGCCGCGCCC CGAACCCATC
GAAATGCCAC CGGAGGAAGA CGTGGTCGGC CCCGCGGCCG AGGATCACTG GCTGCACGAG
GCGCTGGCGG TACGCGCGCT GTTCGACCAC TGGCAGGCTG CCATCCGCCA GCCCAGCAAC
ATGGACGACG CCTGCCGCCA GGTCGAGGAA ATGAGCCTGC GCTGCCTGCG CCGGCAGGTC
GAGCCGGCGT CCCTGGCCAA CCTGTCGCCG CCGCTCATCC TCGAACTCGT CCCGGCCGAA
GGTCCGCCCT TCCTCGCCAC CCTGCTGGCA CGGGACGAGC GGCATGCGCG GCTGGCCGTG
AGCGGCGAAA TCCGCACGGT CGGCCTCGCC GCCCTGACAC TTCGCTGGAG CGGCCGCTAC
GTCCGCTTGC AGCAGGCGCC GCTGATCCAC GGCCGGCACC TGAGCCATGG CAGCCGCGGC
GCCGACGTGG CCTGGGTGGA CCTGCAACTG GAGCGCTGGG AAGGCCGGAG CCGGCCGCGC
GCCGGCGACC CGCTGTTCGG CGACGACCTG GAGCGGCGCG TGCGCCGCTT CCAGCAGGCC
AACGGCCTGC GCGCCGACGG CGTGGTCGGC GCGCAGACCC TGGAGCGGCT GGCCCGCCTG
GGCGGCACGG AAATGGCCGC ATTGAGCCGC TGA
 
Protein sequence
MYNQYFGFSE APFSISPDPR YLFMSERHRE ALAHLLYGLQ IDGGFVLLTG EVGTGKTTLC 
RRLLGQVPEH CDVAFIFNPR LSRLELLETL CEELGIALPD RVRSLKPLFD RINAHLLESN
ARGRKTVLII DEAQNLSAEV LELLRLLTNL ETDRHKLLQI ILLGQTELRD LVARDDMRQL
AQRIVARYHL EPLSGPEVGA YVRHRLAVAG SRAELFAPPL LERLYRLSGG TPRLINVLCD
RALLGACVQG KAGVDRATLD KAAREVLGPA RRARPPAALA AILGIGLLAG MATAGWHLAP
EPSADAGHGG PARLLAAAPT ESMPAPAPPS GDDDTGPLPA SGLPRQEGVQ PLEPPRPEPI
EMPPEEDVVG PAAEDHWLHE ALAVRALFDH WQAAIRQPSN MDDACRQVEE MSLRCLRRQV
EPASLANLSP PLILELVPAE GPPFLATLLA RDERHARLAV SGEIRTVGLA ALTLRWSGRY
VRLQQAPLIH GRHLSHGSRG ADVAWVDLQL ERWEGRSRPR AGDPLFGDDL ERRVRRFQQA
NGLRADGVVG AQTLERLARL GGTEMAALSR