Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_20210 |
Symbol | |
ID | 7760949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 2011070 |
End bp | 2011942 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643804918 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_002799201 |
Protein GI | 226944128 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTCTGGA AAATCCGTGG GCGCAGGATC GGGCCACAAC AAATCCAAGA ACTGGAGGCC CGTATGATTC GTGGTTCCAC TGCACTGGTC GGCATCGTCG GTTCGCCGAT CGCCCAGGTC AAATCCCCGG AAAACTTCAA TGCCTGGTTC GCCGAACACG GCCAGGATCT GGCGATGCTG CCCATCGACC TGCAGGAGTC GTCCCTGGAC GCCTTCCTCG CCACCCTGCG CGGCTGGAAG AACCTGCGCG GTTGCGTGGT CACCGTGCCT TACAAGCAGC TCCTGGCCAC TCGCCTGGAC GCCGTCAGCG AGCGCTCGAC GGCCCTGCGT TCGGTCAACG TGATCCGCCG CGAGGCGGAC GGCCGCCTGG TCGGCGACAT CGTCGACGGC GAGGGCTTCC TCAACGCGGC GCGCCGGCAC GCTTTCGAGC CCGGCGGCAA GCGCGCCCTG GTGGTCGGCT CCGGCGGCGT CGGCAGTGCC ATCGCTTATT CCCTGTGCGA GGGCGGGGTG AGCCGGCTGG CCATCGCCGA CCTCAGCGCC GAGCGCGTCG AGAGCCTCTG CGCGCTGCTG CGCCGGGCCT TCCCGGCCAT CGAGATCGGC GGCGGCCATG CCTCGCTCGC CGATTTCGAC CTGGTGGTCA ACGCCTCGCC GGTGGGCATG GGCGACAGCG GCGAGCTGCC GCTGCCCGAG AGCCTGCTGG AAAGCCTGGC GAAGCACTGC CTGGTCGCCG ACGTGGTGAC CTCGCCGGAG ATCACACCGC TGCTCGCCTT CGCCCGGCGC ATGGGCTGCG CGGTGCAGAG CGGCCCGGAA ATGGCTCGCG CCCAGCTCGG CAATCTCGGC CACTTCATGG GCGTCACGCC CCTGGACATC TGA
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Protein sequence | MFWKIRGRRI GPQQIQELEA RMIRGSTALV GIVGSPIAQV KSPENFNAWF AEHGQDLAML PIDLQESSLD AFLATLRGWK NLRGCVVTVP YKQLLATRLD AVSERSTALR SVNVIRREAD GRLVGDIVDG EGFLNAARRH AFEPGGKRAL VVGSGGVGSA IAYSLCEGGV SRLAIADLSA ERVESLCALL RRAFPAIEIG GGHASLADFD LVVNASPVGM GDSGELPLPE SLLESLAKHC LVADVVTSPE ITPLLAFARR MGCAVQSGPE MARAQLGNLG HFMGVTPLDI
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