| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_19460 |
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| Symbol | agaA |
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| ID | 7760879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 1939192 |
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| End bp | 1941597 |
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| Gene Length | 2406 bp |
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| Protein Length | 801 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643804847 |
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| Product | Agarase |
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| Protein accession | YP_002799131 |
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| Protein GI | 226944058 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCGTC CCCTGGTTCC CCTGCTGTTC GCCTGCTGCC TGGTGCCCCT GTCGGCACGG
GCGGCCGACG AGCAGACGCT GTTCAACTTC GTGCGCCCCA CCGATGTGGT GCAGGTCAAG
GGCGAAGGCG CCTTCCTGCC GGAACTGACC GCGGAGACCA CGGCGGGAGG AGATGTGCTC
CGAAGAGTCA CCTTCAATCC GCAGGAGCGG CCCAGCCTGC GTCTGACGCC GCAGCAGGGC
AACTGGGACT GGTCTTCCGC CGGCGCGGTC AGCCTGCGCA TCCAGAATGC CATGGACTGG
GCGTTGACCC TGCAGGTGAG CATCGAGAGC GCCGACGGCA AGGTTCTCAG GAGTCAGGTC
GCCCTGCCGG CCGGTCCGGC GCAGACCCTG GTACTGCCGC TGCGCGTCAG CTCGCCCAGG
GCGCATGGCA TGCGCGCCGC GCCGCCGATG CCCTGGACCC ATGAAAACCA GCGCCTGCTG
GTGGCGACCA CCCTGGAAGG CGAGATCGAT CCGCGTCAGG TGCAGGCGGT GAGCCTCTCC
CTGGAGAGAC CGGACGTGCA GCAGAGCATT CTGCTCGGCC GCTTCGGCGT GCGCGAGGAT
CTCGAGCCGG CGGCCTACCG GGGGATCGTC GATGCCTATG GGCAGTACAG CCGCGGCGAC
TGGCCGGAGA AGGTGAACAG CGACAAGCAA CTGAAGACGG CGGCCGAGCA GGAGCGGGCG
CAGCTCGATC GCTGGCTGGT CGGGCGGCCG GAGCTGGACC GCTTCGGCGG CTGGCTGAAA
GGACCGCAAC TGGAGGCCAC GGGCTTCTTC CGGGTGGCCA GGCACGAGGG CCGCTGGTAC
CTGGTGACGC CGGACGGCCA TCCGTTCTTT TCTCTCGGCG TGAACACGGT CTCTTCCGGC
AACAGCCGGA CCTACGTCGA AGGGCGCGAG GAGATGTTCC TCGCCCTGCC CGGCAAGGAG
GAGCCGCTGG GCGCCTTCTA TGGGGCCGGG GACAGCCGCC AGGCCACCGG CGCCAACGAC
GGGCGACAGT TCGCCCATGG GCGCTGGTAC GATTTCTATC GGGCGAATCT CTATCGGACC
TACGGACAGA GTTGCAAACC GCCCGTGGAG CAGGCCGCCG AGCCGGAGCG CGTGTTGCCG
GCAGCTCCCA TGGAAGAGGA ACCGGACAAC GTTCAGGTCG CTCCGGAGGG CGGCACGCCG
GCCCCCGGAC AACCGGCTCC CGCCAAGCAG CCGACCGCCG CGCCGCCGTG CGTCGTGCAG
TTCTTCGACG CCCTGCGCTG GCGCGGGCAC ACCTTGGACC GCCTGCAGGC CTGGGGTTTC
AATACCCTCG GCAACTGGAG CGATCTCTCC CTGGGAGCGA TGCACCGGAT ACCCTACACG
ATTCCGCTGC TGATCCGTGG CGACTACGCC ACCATCTCCA CCGGCCACGA CTGGTGGGGC
GGCATGCCCG ATCCCTTCGA CCCGCGCTTC GCCATGGCTG TCGAGCGAGC CATCGCCATC
GCTACCCGCG ATCACCGGAA CGACCCCTGG GTGATCGGCT ACTTCGCCGA CAACGAGCTC
AGTTGGGCCG CGCCGGGGAC GGATCCGAAG GCCCGCTATG CCCTGGCCTA CGGCACCCTG
CGGCAGACCA CCGACATGCC TGCCAAGCGC GCCTTCCTCA AGTTGTTGCG CGACCGTTAT
CGCAACCAGC AGGGGCTCTC CGCCGCCTGG GGCATCGAAC TGCCCGCCTG GGAGCTGATG
GAGGATCCGG GGTTCGAGGC GCCCCTGCCG AGCCCGGAGC ATCCGGCCAT CGAGGAGGAT
CTGCAACGCT TCCAGCAGCT CTTCGCCGAC ACTTACTTCA AGACCATCGC CGAGTCGCTG
AAGTGGCATG CGCCCGACCA TCTGCTGCTC GGTGGCCGCT TCGCCATTAG CACTCCCGAA
GCGGTCGAGG CCTGCGCCAA GTACTGCGAC GTGCTGAGCT TCAACTTCTA CACCCGCGAG
CCCCAGCACG GTTATGACTT CGAGGCCTTG CGCAAGCTGG ACAAGCCGAT GCTGGTCAGC
GAGTTCCATT TCGGTTCGCG GGATCGCGGC CCGTTCTGGG GTGGCGTGGC CGAGGTGTAC
AAGGAAGAAG AGCGCGGCCC GGCCTATGCC CACTTCCTGG AGCGAGCTCT GGCCGAGCCC
TTCATCGTTG GCATGCACTG GTTCCAGTAT CTCGACCAGC CGGCGACCGG GCGCCTGCTC
GATGGCGAGA ACGGCCATAT CGGTCTGGTC GGCGTCACCG ATCGACCATT CGCCGGTTTC
GTCGAGGCGT TGCGCAAGGC CAACCTGAAA GTGGGCAAGG CCTTCGAGCC GGTTGCCACG
CCCGCTGCCG GACAGCTGAA GACGGAGGGC GGCGCTCCCG CCGCGGCACC AGCCAGGACA
CAGTGA
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| Protein sequence | MIRPLVPLLF ACCLVPLSAR AADEQTLFNF VRPTDVVQVK GEGAFLPELT AETTAGGDVL
RRVTFNPQER PSLRLTPQQG NWDWSSAGAV SLRIQNAMDW ALTLQVSIES ADGKVLRSQV
ALPAGPAQTL VLPLRVSSPR AHGMRAAPPM PWTHENQRLL VATTLEGEID PRQVQAVSLS
LERPDVQQSI LLGRFGVRED LEPAAYRGIV DAYGQYSRGD WPEKVNSDKQ LKTAAEQERA
QLDRWLVGRP ELDRFGGWLK GPQLEATGFF RVARHEGRWY LVTPDGHPFF SLGVNTVSSG
NSRTYVEGRE EMFLALPGKE EPLGAFYGAG DSRQATGAND GRQFAHGRWY DFYRANLYRT
YGQSCKPPVE QAAEPERVLP AAPMEEEPDN VQVAPEGGTP APGQPAPAKQ PTAAPPCVVQ
FFDALRWRGH TLDRLQAWGF NTLGNWSDLS LGAMHRIPYT IPLLIRGDYA TISTGHDWWG
GMPDPFDPRF AMAVERAIAI ATRDHRNDPW VIGYFADNEL SWAAPGTDPK ARYALAYGTL
RQTTDMPAKR AFLKLLRDRY RNQQGLSAAW GIELPAWELM EDPGFEAPLP SPEHPAIEED
LQRFQQLFAD TYFKTIAESL KWHAPDHLLL GGRFAISTPE AVEACAKYCD VLSFNFYTRE
PQHGYDFEAL RKLDKPMLVS EFHFGSRDRG PFWGGVAEVY KEEERGPAYA HFLERALAEP
FIVGMHWFQY LDQPATGRLL DGENGHIGLV GVTDRPFAGF VEALRKANLK VGKAFEPVAT
PAAGQLKTEG GAPAAAPART Q
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