Gene Avin_17930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_17930 
Symbol 
ID7760728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1782772 
End bp1783764 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content70% 
IMG OID643804692 
Producthypothetical protein 
Protein accessionYP_002798981 
Protein GI226943908 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00558926 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGTG GCCTGTGGCT GCTGCTGGGC GGTCTGCTCG CTGCCCTGCT GATCCCCCTG 
CTGCTCGGCG GCACCGGGCT GTGGCGGCTG GTGCAGGGTT TTCCGGCCAA TCTGCTGCTG
GCCATGCTCG GCATCATCCT GGTCTGCTGG AACCTCAATG CGCTGCGCCT GCGCCTGCTC
CTGCCCGGCT TCCGGCTATC CCAGAAGGAC GCGCTGGGCA TCGTCATGGC TACCGAGTTC
GCCATCTGCG CGACACCGGG CGGCGCCGGC GGGCCCCTGA CCCTGATGGC GCTGCTGATG
CGCCGCGGGG TATCGGCGGC GCAGGGCACG GCCACCTATG CGGTGGACCA GCTCACCGAC
CTGCTGGTGT TCGCCTGCGC GCTGCTCGGC ATTCTGGTCT ATGCCCTGTC CCATGCCCTG
AGCCCGCACC TCGCCTGGCT GCTCGGCGTC AGCGCCGGCC TGCTGGTGGG GGTGTTCGTC
CTGCTGTTCC TGCTCGGTCG CTTCCATCGC CAGATGTTCC GCCTCAACGG CCGGCTGTTG
CAGCGCCTGG GCGTGAGCAC GCGGCGCCGG CTGCAATACG CGCGCAAAGT GATGCGCTTT
CGCAACGCCC TGCGCCAGAG CCTGAGTCTG CCGCGCCCGC TGCTGCTCGG CGTGTTCCTG
CTCAGCGTCG CGCATTGGGG GCTGCGCTAC AGCGTGCTTT ACCTGACCCT GCGCGGTCTG
GGCAGCGAGC TGTCCTGGGC CTGGACCTTC CTGGTGCAGA TGCTGGCGCT CAGCGCCGGG
CAGGCCAGCC TGCTGCCGGG CGGCGCCGGC GGGGCGGAGC TGGCCTCGGC GGCGCTGCTC
GCCCCGCTGG TCGGCAAGTC GACCAGCGGG GCGGCGATCC TGATCTGGCG CGCCGTCACC
TATTACTTCT ACCTGATCGC CGGCGCACCG GTGTTTCTGC ACCTGGCGGG CCGGCCGCTG
CTGCGGCGGC TGGTGCGCTA TCGGCAATCC TGA
 
Protein sequence
MSRGLWLLLG GLLAALLIPL LLGGTGLWRL VQGFPANLLL AMLGIILVCW NLNALRLRLL 
LPGFRLSQKD ALGIVMATEF AICATPGGAG GPLTLMALLM RRGVSAAQGT ATYAVDQLTD
LLVFACALLG ILVYALSHAL SPHLAWLLGV SAGLLVGVFV LLFLLGRFHR QMFRLNGRLL
QRLGVSTRRR LQYARKVMRF RNALRQSLSL PRPLLLGVFL LSVAHWGLRY SVLYLTLRGL
GSELSWAWTF LVQMLALSAG QASLLPGGAG GAELASAALL APLVGKSTSG AAILIWRAVT
YYFYLIAGAP VFLHLAGRPL LRRLVRYRQS