| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_16360 |
|---|
| Symbol | |
|---|
| ID | 7760571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 1617093 |
|---|
| End bp | 1618322 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643804536 |
|---|
| Product | major facilitator family transporter |
|---|
| Protein accession | YP_002798826 |
|---|
| Protein GI | 226943753 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGC ACGCTCCAGC GGGCACGCCG CAGCTTTCCG CTCGCGCAAT CCTATTGATC
GAACTGGCCC TGGCGATGGG CGGTTTCGGT ATCGGCACCG GCGAGTTCAC CATCATGGGC
CTGATGCCGA ACGTGGCCCA GGATCTGAAC ATCAGCGAGC CCCAGGTGGG GCATGTGATC
AGCACCTACG CCCTGGGCGT GGTGGTCGGC GCGCCGCTGC TGGCGATCCT CGGCGCCCGC
CTGCCACGCC GCATCCTGCT GATGCTGCTG ATGCTGTTCT TCGCCGCCGG CAACTTCGCC
AGCGCCCTGG CATCGGATTA TCACGCCCTG ATGCTTTATC GTTTCATCGC CGGCCTGCCC
CATGGCGCCT ACTTCGGCGT CGCTTCGCTG GTGGCCGCCT CCATGGCACC GCCGGACAAA
CGCGCCAACG CGGTCAGCCG GGTGATGACG GGCCTGACCG TTGCCATTCT GGTCGGCAAC
CCGCTGGCCA CCTGGCTCGG TCAATGGCTG AGCTGGCGCA GCGCCTTCGC CCTGGTCGGC
GCCATCGCCC TGCTCACCGT GGCCCTGGTG TTCATCTACC TGCCGGTGAG CCGTCATGAG
GAAACCAGCA ACCCGATACG CGAACTCCGC GCCTTCAACC AGCCCCAGGT GTGGCTGGCG
CTGGCCATCA GCGCGATCGG TTTCGCCGGC ATGTTCTGCG TGTTCAGCTA CCTGGCGCCG
ACCCTGCTGG AAGTGACCGG GGTGCACGAA AACTGGATTC CGTTCGGCCT GGCCGCCTTC
GGCCTCGGTA CCATCGTCGG CAACATAGCC GGCGGCTGGC TGTTCGACCG GCTGAAATTC
AAGTCCGTCG CCCTGGTGCT GCTGTGGAGC ACCGCGGTAC TGCTGCTCTT TCCGATGTCG
GTCCACTCGC TCTGGACCAT CCTGCCGGCG ATCTTCGCCG TGGGCACCAT GGTCGCCCTG
TCGCCGCCGC TGCAGACCCA CCTGATGGAT GTGGCCACCG AGGCGCAGAC CCTGGCCGCC
GCCTCCAACC ACGCCGCCTT CAACATCGCC AACGCCCTCG GCCCCTGGCT CGGCGGCCTG
GCCATCAGCG CCGGCCTCGG CTGGACCGTC ACCGGCTATG TCGGCGCGGT CACCGCGATC
CTCGGTCTGC TGATCTTCTT CCAGGCCTGG AAGCTGCAAG GCAACCCGGC GCAAAGCGCG
CCAGCCGGGC AGGCAGTGAC GGAACACTGA
|
|---|
| Protein sequence | MTEHAPAGTP QLSARAILLI ELALAMGGFG IGTGEFTIMG LMPNVAQDLN ISEPQVGHVI
STYALGVVVG APLLAILGAR LPRRILLMLL MLFFAAGNFA SALASDYHAL MLYRFIAGLP
HGAYFGVASL VAASMAPPDK RANAVSRVMT GLTVAILVGN PLATWLGQWL SWRSAFALVG
AIALLTVALV FIYLPVSRHE ETSNPIRELR AFNQPQVWLA LAISAIGFAG MFCVFSYLAP
TLLEVTGVHE NWIPFGLAAF GLGTIVGNIA GGWLFDRLKF KSVALVLLWS TAVLLLFPMS
VHSLWTILPA IFAVGTMVAL SPPLQTHLMD VATEAQTLAA ASNHAAFNIA NALGPWLGGL
AISAGLGWTV TGYVGAVTAI LGLLIFFQAW KLQGNPAQSA PAGQAVTEH
|
|---|
| |