| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_13880 |
|---|
| Symbol | |
|---|
| ID | 7760325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 1347340 |
|---|
| End bp | 1348143 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643804281 |
|---|
| Product | transcriptional regulatory protein, IclR family |
|---|
| Protein accession | YP_002798580 |
|---|
| Protein GI | 226943507 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.176969 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGGTG AGCAAACGGA ACGCAGGAGC AAGGGGTCTT CCATTTCGCG CGTCCTGGAG
ATCGTCGAGG CCGTCGCGCA GTCGGAGCGG GCGCTATCGC CGGCCGAACT GGCCTTCATG
CTGGACATCC CCAAACCCAG CATCCATCGC CTGCTGCAGC AGTTGCAAGC CGACGGCTAC
CTGCAGGTGG ATCTGCGCGG GCTGATCGTG CCCAGCGACC GCCTGCAGCG GATCGCCATG
GGGGTGCTGT ACGCCAGCCG GCACAAGGCG CTGCGCCGTT CGATCCTGCA GCGCGTGGCG
AGGGAAACCG GCGAAACCTG CGGTATCGCC ATCCCCGACG GCATCGACAT GGTCTATTAC
GACCGGGTGC AGAGCAACTG GCCGCTGCAG ATTCATCTGC CGGTCGGCTC CCATGTCCCG
ATGTGGTGTT CGGCCAGCGG CAAGCTCTAC CTGAGCAGCT TCTCCAGGGC ACGCCGCCAG
CAGATCCTGC GCAATCTGCC GCTCACGCGG CTGTCGCGCA ATACCATCAC CGATCCGCAA
GAGCTGGAGG CTGCCCTGCA GTCGATCGCC GAAACCGGCC TGGGCGTGGA CAACGAGGAG
TTCATCGACG GCATGGTGGC CTGCTCGGTG CCCATCCGCG GGCCGGAAGG CCGCCTGCAT
GCCTGCCTGT TCGTGCATGC GCCGACGCTG CGCAGGAACC TGGACGAACT CGAGGCGATG
GAGCCGCTGT TGCGTCGTGC CGCGGACGAA CTGGCCGAGC TGCTGCTCGA AGCGCGTCCG
CAGGACGGCC TGCCATCGGC TTGA
|
|---|
| Protein sequence | MTGEQTERRS KGSSISRVLE IVEAVAQSER ALSPAELAFM LDIPKPSIHR LLQQLQADGY
LQVDLRGLIV PSDRLQRIAM GVLYASRHKA LRRSILQRVA RETGETCGIA IPDGIDMVYY
DRVQSNWPLQ IHLPVGSHVP MWCSASGKLY LSSFSRARRQ QILRNLPLTR LSRNTITDPQ
ELEAALQSIA ETGLGVDNEE FIDGMVACSV PIRGPEGRLH ACLFVHAPTL RRNLDELEAM
EPLLRRAADE LAELLLEARP QDGLPSA
|
|---|
| |