Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_04400 |
Symbol | hoxH |
ID | 7759399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 417280 |
End bp | 418539 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643803361 |
Product | Soluble nickel-dependent hydrogenase, large subunit, HoxH |
Protein accession | YP_002797671 |
Protein GI | 226942598 |
COG category | [C] Energy production and conversion |
COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCCGCG TCGAGGGCGA GGGCTCCCTC GACCTGCACA TCGAAGGCGA CCGGGTCGTC GCGGCGCGGC TCGGCATCTT CGAGCCGCCG CGCTTCTTCG AGGCCTTCCT GCGCGGGCGC GGCCATGCCG AGGTGGCGGA CATGGTGGCG CGGATCTGTG GCATCTGCCC GGTGGCCTAC CAGATGAGCG CGGTGCACGC CCTGGAAAAC GCCTTCGGCG TGCGGGTCGA GGGGCAATTG CGCGCGCTGC GCCGGTTGCT CTACTGCGGC GAGTGGATCG AAAGCCACGC GCTGCATGTG GTGATGCTGC ACGCCCCGGA CTTTCTCGGC TATCCGGACG CGATCCGCAT GGCGGCCGGG CACGGCGACC GGGTGCGCGA CGCCCTGGCG CTGAAGAAGG CCGGCAACTC GATAATCCGC CTGCTCGGCG GGCGCGAGAT CCACCCGGTC AACGTCCGGG TCGGCGGCTT CTACCGCGTG CCGAGCCGCG CCGAGCTGGC GCCGCTGGCC GAGGAACTGG ATCGGGCCCG CGACATCGCC GTCGGGCTGG TGCGCTGGGT GGCGGGCTTT CCCTTTCCGC ACATCGAACG GGACTACGAG TTCGTCGCCC TGCGCCATCC GCACGAATAC CCGCTCAACG AGGGACGGCT GGTATCCAGC CGCGGCCTCG ATATCGACAT CGCCGATTAC GAGACGGAGT TCGAGGAGCG CCAAGTGCCG CACTCGACGG CGCTGCACTC GCATCTCAAG CGCCGTGGCG CCTATCTGGT CGGGCCGTTG GCGCGCTACG CGCTGAACTT CGACCGATTG CCGGAACATA TCCGGGCGCT CGCCGGCGAG GTCGGCCTCG GTCCGCTGTG CCGCAATCCG TTCCAGAGCA TCGTCGTGCG CGCCCTGGAA ATCCTCTACG CCTGCGAGGA GGCGCTGGCC ATCATCGCCG CCTACCGGCC GCCGGACATG GCCTGCGTGC CGCTGGAGCC ACGCGCCGCG ACAGGTTTTG GCTGCACCGA GGCGCCGCGC GGCACCCTCT GGCACCGTTA TGAACTGTCC GCCGACGGTT CCGTCGAGGC CGCGCGCATC GTCCCGCCCA CCGCGCAGAA CCAGCCGAGC ATCGAGGCGG ACCTGGAGGC GGTCGCCACG TCGCTGCTCG ACCAGCCGGA GGAGGTCATC CGTCGGCGCT GCGAGCTGAG CATCCGCAAC CACGACCCCT GCATCTCCTG CGCGACCCAC TTTCTCAAGC TGTCCGTGCA CCGCGCATGA
|
Protein sequence | MARVEGEGSL DLHIEGDRVV AARLGIFEPP RFFEAFLRGR GHAEVADMVA RICGICPVAY QMSAVHALEN AFGVRVEGQL RALRRLLYCG EWIESHALHV VMLHAPDFLG YPDAIRMAAG HGDRVRDALA LKKAGNSIIR LLGGREIHPV NVRVGGFYRV PSRAELAPLA EELDRARDIA VGLVRWVAGF PFPHIERDYE FVALRHPHEY PLNEGRLVSS RGLDIDIADY ETEFEERQVP HSTALHSHLK RRGAYLVGPL ARYALNFDRL PEHIRALAGE VGLGPLCRNP FQSIVVRALE ILYACEEALA IIAAYRPPDM ACVPLEPRAA TGFGCTEAPR GTLWHRYELS ADGSVEAARI VPPTAQNQPS IEADLEAVAT SLLDQPEEVI RRRCELSIRN HDPCISCATH FLKLSVHRA
|
| |