| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_03610 |
|---|
| Symbol | |
|---|
| ID | 7759321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 341611 |
|---|
| End bp | 342831 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643803285 |
|---|
| Product | ROK (Repressor, ORF, Kinase) domain protein |
|---|
| Protein accession | YP_002797596 |
|---|
| Protein GI | 226942523 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.759282 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGC CCGCCGGTAC GGGGCGCGAC GGCGCGGGCG GCCCGCGCGG CTCGAACCTG
CGCGGCGTGC GGGCGCACAA CGAGCGCCTG GTGCTGTCGC TGCTGCGCAG CCGGGGCGAA
ATGAGCAAGG CCGATCTCAC CCGGCTGACC GGACTCTCGG CGCAGACGGT GTCGGTCATC
ATGCGCGCGC TGGAGGACGA CGGGCTGATC CGCCGCGGCC AGCCGCTGCG CGGCCGCATC
GGCCAGCCGT CGGTGCCGCT CGGCCTGGCG CGCGACGGGG CGTTCAGCCT CGGCCTGAAG
GTCGGCCAGC GCAGCCTCGA TCTGGTGCTG GTGGACTTTC TCGGCGGCAT CCGCACGCGG
GTGACCGAAC GCCACCGCTA CCCGACGCCC GATACCGTGG TGCGCTTCGC CGTCAGCGCG
ATCGCCGACA TTCTCAGCCA GCTCGGCGCC GATGAGCGCG CCCGGATCGC CGGCCTGGGG
ATCGCCATGC CGTTCCACAC CTGGCACTGG TGGCGCACCC TGGGCGTGCC GGAAGAGGCG
CTGCTCGACT GGCGCGGGCG CGACATCGGC GCCGAGATCG GCGCGGCGAC CGGCCTGCCG
GTCCAGGTGC AGAACGACGG CACGGCCGCC TGCGGCGCCG AACTGCTGTT CGGGCACGGG
CGCGGACCGC GGGACTTCCT GTATTTCCAC CTCGGTTATT TCATCGGCGG CGGCATCGTC
CTGAACGGCA GCCTGGTGCC CGGACGGACC GGCAATGCCG GGGCGATCGG CTCCATGCCG
GTGCCGGACG GGCGGGGCGG ACAGACCGTG CTGCTCGACA TCGCCTCGCT GTCGGTGCTG
GAGCGGATGC TGGGCGAGGC GGGCGAGGCC GCCGAGCGCC TGTGGGACAC GCCGTCGGAA
TGGCGTTTCC CGGTGCCTCT GGTCGAGGCC TGGGCCGACG CGGCGGGGCG CGCGATCGCC
GCGGCGGCCG CGGCGGCGGT GGCGGTCTAC GACTTCGAGG CTTGCCTCGT CGATGGCTGG
ATGCCCGTTC CGGTGCGCAG CCTGCTGGTG GAGCGGGTGC GCGCCCACCT GGCGGCCATC
CCCGCCAGCG GCATCGACCT GCCGCTGATC GAGGCGGGCA GCATCGGCGC CCATGCCCGC
TCGCTCGGCG CGGCCAGTCT GCCGCTGTCG GCGCGCTTCC TGCTCGATCT GCAGGCCTTC
GCCTCGGCCG GCGCCGGCTG A
|
|---|
| Protein sequence | MSLPAGTGRD GAGGPRGSNL RGVRAHNERL VLSLLRSRGE MSKADLTRLT GLSAQTVSVI
MRALEDDGLI RRGQPLRGRI GQPSVPLGLA RDGAFSLGLK VGQRSLDLVL VDFLGGIRTR
VTERHRYPTP DTVVRFAVSA IADILSQLGA DERARIAGLG IAMPFHTWHW WRTLGVPEEA
LLDWRGRDIG AEIGAATGLP VQVQNDGTAA CGAELLFGHG RGPRDFLYFH LGYFIGGGIV
LNGSLVPGRT GNAGAIGSMP VPDGRGGQTV LLDIASLSVL ERMLGEAGEA AERLWDTPSE
WRFPVPLVEA WADAAGRAIA AAAAAAVAVY DFEACLVDGW MPVPVRSLLV ERVRAHLAAI
PASGIDLPLI EAGSIGAHAR SLGAASLPLS ARFLLDLQAF ASAGAG
|
|---|
| |