Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_9847 |
Symbol | |
ID | 7379982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011986 |
Strand | + |
Start bp | 37308 |
End bp | 38681 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643648272 |
Product | two component sensor kinase |
Protein accession | YP_002546509 |
Protein GI | 222102368 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGCGG GTAGTTTTCT CAAGAGTACC GCCGTCAGGC TCGCTATTAT CTACATTTCA CTTTTTGTTT CTGCGTACCT GATTGCGAAC ATTGTAGCTT ATCAAATGGT TGTTAAATTT TTGGACGACC GACTGAATTC TAACGTCATG GAACGGTATC GCGAGATCGC GTCAGCCTAC GAGGCGCGCG GTCTAAATGG GGCCGTTCAG ATGATTGAAA GTCATGGTCC CGCTGTTAGG GGTGAAGAGA CCGTGTATAC GTTGCGAGGT GCGACAGACG ACCTGGTTGC CGGAAACGCC AAATTTTCGG ATGTGCCAAT TGGCCTTTCG ACTTTTCGAT CTAACAGCCA ATACGAAAGT GCACCACACT ACAAATTATT CCGGGGACCG CTGGGAGAGT ATGACCTGGT TGTCGGAATT AGCTACGGCG ACACGGACCA ACTGGCTCGA ATCGTCCTGA TAAGTTTTGG ATGGGCGACG GCAATAATCT TGGGCGTTGG AATGACCGGA GCTTCGATTT TTGCTCATCG AACTCGTAGG CGCATTTTCG TTCTTTCTAC CATTGCGCAT GAAATCGGGC ATGGCGATCT CTTCAAGCGC CTTCCGATTT CCTCTCGTAT GGATGAAATT GATGTCCTTT CCACCGAAGT CAACGTCGCA TTGACACGGC TTGAGTCAAG CGTGATCACG TTGAAGCAGG TTACGACTGA CGTTGCACAT GACTTAAAAA CGCCAATTGC GCGTACGTTT CTGATTCTTG AGGACTCACT GCAATCCGAT GTTCCTGGTG ATATGAAGAG CGGTATTGAG ATCGCTCTCG TGGAACTGAA GTCTACGTCT GAAACATTTG ACGCTGTTCT TCGGATTGCG CAGATTGAGT CGCGCAGTCG AACTACCAAT TTCAGGGTTT TCAATCTGAA ATCATTGGTT CACGATATTT ATGAGGTTTA CGAAGCTATA GCCGTGGATG CGGGTTACGA CCTCACGCTT GCCGACAGCA TTTCCGACTC TTGGATCGAA GGCGATCCAG ATTTGGTTAG ACAGTTGTTG GCCAATTTGC TTGCTAACGC CATGCGCCAC ACCCAAGCTG GCTCTAATAT CGTTTTATCA CTTTCCTACA ACGACGATAC CATTTATCTG AGCGTTTCCG ACAACGGTCC AGGAATTCCT CGTGACGAAC GTGAGAGAGT TTTTGATCGC TTTTATAGGC TTGAGAAGAG TAGGACGACG GCCGGGTCCG GATTGGGTCT CACGTTGGTC AAAGCTATTG TGGGTCTTCA CGGGGCGACT ATTGAGCTGC TTGACAACGA TCCCGGCCTG TCTGTTGTTG TGGGTTTCCC CCAGGTGAAG AGGGAAGATC AGCAGGCGCA TTAA
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Protein sequence | MLAGSFLKST AVRLAIIYIS LFVSAYLIAN IVAYQMVVKF LDDRLNSNVM ERYREIASAY EARGLNGAVQ MIESHGPAVR GEETVYTLRG ATDDLVAGNA KFSDVPIGLS TFRSNSQYES APHYKLFRGP LGEYDLVVGI SYGDTDQLAR IVLISFGWAT AIILGVGMTG ASIFAHRTRR RIFVLSTIAH EIGHGDLFKR LPISSRMDEI DVLSTEVNVA LTRLESSVIT LKQVTTDVAH DLKTPIARTF LILEDSLQSD VPGDMKSGIE IALVELKSTS ETFDAVLRIA QIESRSRTTN FRVFNLKSLV HDIYEVYEAI AVDAGYDLTL ADSISDSWIE GDPDLVRQLL ANLLANAMRH TQAGSNIVLS LSYNDDTIYL SVSDNGPGIP RDERERVFDR FYRLEKSRTT AGSGLGLTLV KAIVGLHGAT IELLDNDPGL SVVVGFPQVK REDQQAH
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