| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9610 |
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| Symbol | |
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| ID | 7381950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011991 |
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| Strand | - |
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| Start bp | 78790 |
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| End bp | 80637 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643653285 |
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| Product | ABC transporter nucleotide binding/ATPase protein |
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| Protein accession | YP_002551456 |
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| Protein GI | 222109191 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTCCG AAGTGAGCTC TGAAGGACTT TTCGGTCGCC TCATCAACTG GCTGCAACAG
CTTGTCGCTA TAACGCCAGC CGTTGAAAAT ATTGTCCTCC CAGATCGGAT TGGGAAGTTT
TACTGCTTCT TTCTCATTCA AGCTTGGCGT CCCTTGTTAT GGCTCTTAGC TATTGGCACT
GCAGTGGCGA CCGCTGACGC CATCATCCCG GTCGCGATCA GCCATTTCGT CCAGTTACTC
GGTGAAAATT CCACATCGTT TCCAACCTCA ACAGTCGCGG TTATCGTCCT TTTTATGCTC
GCGCACCCGC TGCTGACCAG CGCGCAAAGA CTAATCGTCA ATCACTCCAT TTCCGCGAAT
ATTGCTACGC TGGTTCGGTG GCAGAGTCAT TCATACATCG CGCGTCAACC TATTTCATTT
TTCAACAGTG ATTTGACGGG AAAACTTGCG AATCGAGTAT TACAGACGGG CCCGGCCCTG
CGAGACACGA TCGTCACCGT GGTGACCTCG GTGTGGTACA TCGTCATCTT CATTGCGACC
ACGATATTTT TTTTGGCACA GGCTGATGTT CGCCTCATTG TGCCAACCCT AATTTGGGTG
ATCTCATACC TACTTCTTCT TAGAGTATTC CTTCCTCGGA TGAACCGTCA TTCACGTGAT
ATGTCCAGCA TGAGGTCGCT CGTCTCAGGC CGCCTTGTAG ATAGCTATTC GAATATTCAG
ACGGTTAAGC TCTACTCCCA TGACGGTTCG GAAAATAGCT ACATAAAACA CGGGCTGGTG
ACACACAATG AAGCAAACCA AAAGTTACTA GCTCAGAACA GTTTTTTTGG TACCGCTCTC
TCGTTCATAA ATGGGACGCT AATCAGCTCG ACTTTGGCAT TGTCGCTATG GTTGTCAAAA
AATCACGCGG TTGAACCAAG CCAATTCGCA ATGATACTTC CGTTGGTGTG GCACATAGCC
AACACTTCGA CCGCAATAAC CCAGCAGATG TCGTCAATCT TCGAGAATTT CGGTGTAGTA
CAGGAAGGGA TGAGATCCAT AACCGCGCCG TTCCCTCCCG AAGACGGGTC TTGCTCAGAA
GAGCTGAGGG TTCATGAACC GACTGTAGTT TTTCAAAACG TAACTTTTCG ATACCCTCGC
TCTTCAGCCG CGGTCGTAAG TTTGAATTTC TCCATTAATA GCCATGAGCG AGTCGCAATT
GTGGGCTCCT CGGGCGCCGG TAAATCAACC ATCATAGGCT TGCTGTTACG CCTATACGAG
GCGGACCAGG GCACAGTATC CATCTGCGGT CAGGACATTC GCTCGGTCAG CGTACGTAGC
CTGCGAGCTT CTATCGCAGT CGTATCTCAA GAAACATCTA TTCTAAACCG TTCTGTCTTT
GACAACATTA GTTTTGGTAT GCCTCACACG TCGGCATCTG AGGTCGTCGA AGCTGCGACA
ATGGCTGGTG CCCATGAATT CATCCGCCAA CTTAGGGACA AAGATGGCCG CGTTGGCTAT
GCAGCACACG CGGGCGAAAG GGGTGTAAAG TTTTCAGGTG GTCAACGGCA GCGCATTGCG
ATCGCGAGGG CTCTCCTTAA AAATTCCCCG ATAATTGTGC TTGATGAAGC TACATCGGCT
TTGGACTCAG AATCTGAATT TGAGCTGAAG AAACGCCTTG AACCGCTGCT GCGCCACAAG
ACTGTTATCG CGATTGCTCA TCGGCTCGGG ACAATTAAGG ACTTCGATAG GATCATCGTA
CTCGAAGGTG GGCGAATTGT CGAAATGGGT TCTCACGAAC AATTATTACG CTCGGAGGGC
AGATATGCTT TACTTTGGAA CCGCCAAATT GAAGGCATAA GCAACTAG
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| Protein sequence | MSSEVSSEGL FGRLINWLQQ LVAITPAVEN IVLPDRIGKF YCFFLIQAWR PLLWLLAIGT
AVATADAIIP VAISHFVQLL GENSTSFPTS TVAVIVLFML AHPLLTSAQR LIVNHSISAN
IATLVRWQSH SYIARQPISF FNSDLTGKLA NRVLQTGPAL RDTIVTVVTS VWYIVIFIAT
TIFFLAQADV RLIVPTLIWV ISYLLLLRVF LPRMNRHSRD MSSMRSLVSG RLVDSYSNIQ
TVKLYSHDGS ENSYIKHGLV THNEANQKLL AQNSFFGTAL SFINGTLISS TLALSLWLSK
NHAVEPSQFA MILPLVWHIA NTSTAITQQM SSIFENFGVV QEGMRSITAP FPPEDGSCSE
ELRVHEPTVV FQNVTFRYPR SSAAVVSLNF SINSHERVAI VGSSGAGKST IIGLLLRLYE
ADQGTVSICG QDIRSVSVRS LRASIAVVSQ ETSILNRSVF DNISFGMPHT SASEVVEAAT
MAGAHEFIRQ LRDKDGRVGY AAHAGERGVK FSGGQRQRIA IARALLKNSP IIVLDEATSA
LDSESEFELK KRLEPLLRHK TVIAIAHRLG TIKDFDRIIV LEGGRIVEMG SHEQLLRSEG
RYALLWNRQI EGISN
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