| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9608 |
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| Symbol | |
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| ID | 7381948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011991 |
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| Strand | - |
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| Start bp | 76409 |
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| End bp | 77671 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643653283 |
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| Product | isopropylmalate/homocitrate/citramalate synthase |
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| Protein accession | YP_002551454 |
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| Protein GI | 222109189 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.793955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGATT TAATCCTGGA GACAGCGCTT AGCAATAGGG TTATCTTTCA TGAAGAGGTG
GCGAGGGACG GGGCGCAAGG GAAGACGCTC CTGAATGGCC ATCAGAGAGT TCAAATCGCA
AAACGTCACA GCTCCATTTT CGGTGAATTC GCGCCTTATC ACTTGGTCTT CAATGCTGGT
TTCCCGAGTG CTGGCAAGGA TGAGCTTGAA GCGACAAGGC AGGTCGTTGA TTGCGTCGAC
GAATGCTATG TCGGAGCAGC TGGACGAGCA ACTCGGCAAG ATGTTGATTT GTTGCTCCAG
GCGGTACACG GCGCGCGGCA CGGTAGGATC TTCATTGCTG TGCCTGCCTC CAATCCTATG
GCATATTCCA TGATGCATTG TACGGCTGAG AAGGCAAAAC AAGCGGCATT GGATATGGTA
AGATATGCCA GAGATAAGAA CCCAGCCTTG ATGGTTGACG TGGCCCTTGC AGATGCATCT
CGTTCCGACG TGGGCTTTCT AGCCGCGTCG GCGGCCGAGT ACGCCGCCGC CGGTGCATCA
ATGGTGATCG TATGTGACAC GGTGGGGCAG TTTTTTCCGT CGGAAAGCCG ATGGTTTTTT
GACGAACTTG CTCGACGGTC TGATCCGGAT TTGCGTTACG TTGCTCACAT GCACAACGAT
CTTGGCTTCG GCTTAGTCAA TACACTTGAA GCTTTGTCTG CCAAAATATA TGGCCTGACG
AGTTCATGGC TCTCTCTTGG AGAGCGGGCA GGAATGCCTG CAACAGAACA GTTACTGTTT
GCGCTTGGCT ATCAAAGCAG TCTTTTGCCA AAAAAGTTGG GCGTCGTGGA TGAGATATGG
CGCTCACCAC CTGATCTACG TCAGCTCTCG CCGATCGCAA GGTACGTCAG TCAAAGTACA
CGAAGGCCTC TCATGACAAC CGATCCCATT GTGGGAACAG GTGTGAACAC GATTTCGACC
GGCACGCCAT TCACGAATCC GGCTCTCTTT CAGCCGTTCG ACCCCTTAGA GATACTTGGA
GTTGAACCAA AGGTGCTGTT GAGCTCTCTA GCAAGCCACC GCATAATTCA TGCCGTTGCG
GCTCGGCTAG GATGGGCGCT CGACCAGTCT CAGGCATCCG CAGCTCTTGA ATGGGTAAAG
GCCGAGGCCT TCAGCCGCAA TGTAGCTATT ATTGAAGATG AAGACTTTGA GCATTTTTTA
AAGGGAGCGA ACTTCGCCCA AACATCCGCC GCCGCGAAGG ATCACCTTAG GATCTCTCGA
TGA
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| Protein sequence | MSDLILETAL SNRVIFHEEV ARDGAQGKTL LNGHQRVQIA KRHSSIFGEF APYHLVFNAG
FPSAGKDELE ATRQVVDCVD ECYVGAAGRA TRQDVDLLLQ AVHGARHGRI FIAVPASNPM
AYSMMHCTAE KAKQAALDMV RYARDKNPAL MVDVALADAS RSDVGFLAAS AAEYAAAGAS
MVIVCDTVGQ FFPSESRWFF DELARRSDPD LRYVAHMHND LGFGLVNTLE ALSAKIYGLT
SSWLSLGERA GMPATEQLLF ALGYQSSLLP KKLGVVDEIW RSPPDLRQLS PIARYVSQST
RRPLMTTDPI VGTGVNTIST GTPFTNPALF QPFDPLEILG VEPKVLLSSL ASHRIIHAVA
ARLGWALDQS QASAALEWVK AEAFSRNVAI IEDEDFEHFL KGANFAQTSA AAKDHLRISR
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