Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_9597 |
Symbol | traB |
ID | 7381941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011991 |
Strand | + |
Start bp | 69985 |
End bp | 71127 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643653276 |
Product | conjugal transfer protein TraB |
Protein accession | YP_002551447 |
Protein GI | 222109182 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGGCGATCA ACGCGGCGTT CGTCGCCGGC GGCTGCATTA CCGGCGCGGC GGGCTGGAGC GGTCATGCGC TCACGCTTCC GATCGGCATC GCCTTTCCGG CCCTCTGGGC ATTCGCCCCC TCCCGGATCG TGGCAGCGCT CGTGGCGGCG GCCTATTTCC TGGGAGCCTC GCGCGGCCTG CCGGTCGGAA CATCGATCTT CTTTGGCGAG CAGCTCGCCA TCGGCATTTC GTTCTGGCTC GCCGCCTCGA TCCTCTTCGT CATCGTTCAT GCCGCCCTGT GGGCGTCAAA GGGCGGGCGG CATCGCCCGC TGCGCTACGC GGTCGCCGCC GTTATGATGA GTGTGCCGCC GTTCGGAATT ACGGGCTGGG CTAGCCCGAT TACGGCGGCC GGCGTGCTGT TTCCCGGTTG GGGCTGGTAC GGTCTGACTG CGATGGCGGT CGGCCTGGTC ATCATGACCA CGAAGTATTG GCCGACCGCA GCGCTTGTCC TGGGAGGATT TTACGCCTGG TCCGCTACAT CGTGGACCGC GCCTACAGTG CCTGATCGCT TGGCAGGGAT CAACACGCAG TTCAAGTTTA CCACAGCCGG CCAATATGCC GACTACGCGC AGCATCTTGA GACGATCGCA ATGGTCAGGC AGGCCGTGGG GCAGGGCGCG TCGGTCGTTG TCCTGCCCGA GAGCGCCTTC GGTCTCTGGA GCCACACCAC AGAGAGCCTG TGGCAAGGCG AGCTCACCGG TCTTGATGTC CGGATCATTG GCGGTGCGGC CGTCGTCGAT CCCACCGGCT ACGACAATAC GATGATCGAA CTGACACCGA AAACATCGCA AATTCTCTAT AGTCAACGAA TGCCGGTCCC GGTTTCGATG TGGCAGCCAT GGGCAACAGG TGGCGCGGAC GCTCAGTTCT TCGGCAATCC GTATGTGATT ATTGAGGGGA AGCGGGCAGC GCCACTTATC TGCTACGAGC TGCTTTTGGT CTGGCCTGTA CTGCAATCCA TGATGTACGA ACCTGATATG ATTGTGGCGG TCGGCAATGG CTGGTGGACG GGCGGCTCCA ACATCGTTTC CATCCTGAAA GCAAGCGGAG AGGCATGGGC CTCGCTCTTC GGCCTTCCAC TCGTGATGGC GTTCAACATG TAA
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Protein sequence | MAINAAFVAG GCITGAAGWS GHALTLPIGI AFPALWAFAP SRIVAALVAA AYFLGASRGL PVGTSIFFGE QLAIGISFWL AASILFVIVH AALWASKGGR HRPLRYAVAA VMMSVPPFGI TGWASPITAA GVLFPGWGWY GLTAMAVGLV IMTTKYWPTA ALVLGGFYAW SATSWTAPTV PDRLAGINTQ FKFTTAGQYA DYAQHLETIA MVRQAVGQGA SVVVLPESAF GLWSHTTESL WQGELTGLDV RIIGGAAVVD PTGYDNTMIE LTPKTSQILY SQRMPVPVSM WQPWATGGAD AQFFGNPYVI IEGKRAAPLI CYELLLVWPV LQSMMYEPDM IVAVGNGWWT GGSNIVSILK ASGEAWASLF GLPLVMAFNM
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