Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_9259 |
Symbol | trbG |
ID | 7367857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011984 |
Strand | - |
Start bp | 202858 |
End bp | 203748 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643644420 |
Product | conjugal transfer protein TrbG |
Protein accession | YP_002542717 |
Protein GI | 222083314 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGGACCGCG CAGCTTTGAA AGGCATGGCC CCGAACATGA ACATTCGACT GAGACGTTTT TCGGTCACCC TGACTGCTGC AACGATCCTC GCCGTCATCG TGCCGTTTTC GGCTTTTCTT TCCTCACGCG CGCTCGCAGC CGATGGCGTC ACCGCCAATG AGGCGAAGGG GATGGGAATT TCCACCCAGT GGCGCGGATC ACGCGGACTT GTCACGAAAG GACCGGACGG GAAGGTGATC TTCCTCTACG GCGAGGTGCA GCCCTCCGTG GTTTGTTCGC CCTTGCAGGT CTGCGATATC GAGCTCCAGA GCGGCGAGGT GGTTCGCGAC GTGCTGGTCG GCGACACCGT CAGGTGGAAG GTCGAGCCCG CAACGTCAGG AGCGGCGGGA GGGCAGGCGA TCCACCTGAT CGTCAAGCCA TCCGAGCCGA ACCTTGTCAC CTCGATGGTG GTGACAACCT CGCGCCGCAC CTATCACATC CAGCTCAAGT CGCATGCAAA CCAATACATG GCCCGCGTCG GCTTCGAATA TCCGGAAGAC GTTTCCACCA AGCTCGCTGA CATCAACGCG CGGATGGAGG CAAGCACGAT CCCCGGCACC GGCGTCCCGG CCGAGCAGTT GAATTTCTCG TATTCGGTCT CCGGCAATGC CGGCTGGCGG CCGACACGGG TCTATAGTGA CGGGGAAAAG ACCTACATCC AGTTCCCGCG CTCGATCTCC AGCCAGGACG CGCCGGTTCT CTTTGTCGTC TCGGGAGGAC AGAACCGCAT CGTCAACTAC CGGATGAAGG GTGACATGAT GGTGGTCGAC TATCACGTCG ATCGTGCGGT CCTTGTTTCC GGCGTCGGCT GGAAACAGGA GAAGGTGACG ATCCGGCGGG GAGGGCGGTG A
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Protein sequence | MDRAALKGMA PNMNIRLRRF SVTLTAATIL AVIVPFSAFL SSRALAADGV TANEAKGMGI STQWRGSRGL VTKGPDGKVI FLYGEVQPSV VCSPLQVCDI ELQSGEVVRD VLVGDTVRWK VEPATSGAAG GQAIHLIVKP SEPNLVTSMV VTTSRRTYHI QLKSHANQYM ARVGFEYPED VSTKLADINA RMEASTIPGT GVPAEQLNFS YSVSGNAGWR PTRVYSDGEK TYIQFPRSIS SQDAPVLFVV SGGQNRIVNY RMKGDMMVVD YHVDRAVLVS GVGWKQEKVT IRRGGR
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