| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9200 |
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| Symbol | |
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| ID | 7367738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | - |
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| Start bp | 156633 |
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| End bp | 157757 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643644383 |
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| Product | ABC-type sugar transport system periplasmic component |
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| Protein accession | YP_002542680 |
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| Protein GI | 222083277 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTCAT GGACTTCGGA AGGGGAGGCG GCCGCGATTG CGAAATTCGC CGATGCGTTT
AATGCCGCAG GGGGCAAGTG GATCGATATC GCCACGGCTG GCGGCAATAA CTCGCGAAGT
GCTGCCGTGG CTCGCATAAT CGCAGGAAGT CCACCGGATG CTGCACAATT TAATACCAGC
ACGCAGTTCT ATGATCTGGT CAGCTCGGGC AAGCTCAACA GCCTTCAAAG TTACGCGGCA
AAAGGCAATT GGGAGAAGGT AATACCTGAA GCGCTTCTCA ACGTCGCCAA GCGCGACGGC
GAAATCTATG CGCTACCGGT CAACATGTCC GGCGTCAACT TCGTCTTCTA CAGCAACAAG
GTTCTGGCCG ACGCTGGGAT CAGCCGCCCT CCTGTTGACT GGGATGGGAT GCTGGCTGCG
ATGGAAACCC TTAAAGGCAA GGGTCTTGTT CCTTTGGCGG TAGGCGGAGA CGGCTATATT
GGGCTCGTCT TCTACTCGAT TTTGGCTGAC TATCTCGGGA CTGAACACTA CAATCGTCTT
TTCACCAAGC GAGATCCCAC CGTTGATGAA GCAGGCATCC TGAAGACCTT CCAGACATTT
GCGAAGCTCC GTGACTACAC AGACAGTAAC TGGTCAGGCC GTAGCTGGAA CCAAGCGACG
CAGATGCTGA TCAATGGGCA AGCCGGCTTC CAGGTCGTCG GCGACTGGGC CAAGGCAGAG
TTCATTTCGA ACAAACTGAC GGCGGGTAAG GAATATGGCT GCATGCTGCC CAAAGGCACT
GTCATCATGG GTGGGGACGT CATCATCTTC CCCAAAAAAG GCGATGCAAT TTCTCCGGCC
CAAGATAAGC TTATTCAAGC CTTTGCCGAC GTGAAGGCCC AGACAGAATT CAGCCTCCTG
AAAGGGTCCA TCCCTGCCAG AACGGACGTC AATCCGGCCG ACTTCGATGT CTGCTCGCAA
GCAGCATTGA AAGCCGCCTC CAGCCCCGAG ACACGGTCAC CTCGTCCCCG GATGGTTATC
CCCTCGGATG TCGAGGGGGA GATCGAGGAC ATGCTTGTGG AGTTCTTCGG ATCCACGATG
TCGCCAGAAG AGGGCGCCGA GCAGTTCTCC GACCTGCTTC AGTGA
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| Protein sequence | MHSWTSEGEA AAIAKFADAF NAAGGKWIDI ATAGGNNSRS AAVARIIAGS PPDAAQFNTS
TQFYDLVSSG KLNSLQSYAA KGNWEKVIPE ALLNVAKRDG EIYALPVNMS GVNFVFYSNK
VLADAGISRP PVDWDGMLAA METLKGKGLV PLAVGGDGYI GLVFYSILAD YLGTEHYNRL
FTKRDPTVDE AGILKTFQTF AKLRDYTDSN WSGRSWNQAT QMLINGQAGF QVVGDWAKAE
FISNKLTAGK EYGCMLPKGT VIMGGDVIIF PKKGDAISPA QDKLIQAFAD VKAQTEFSLL
KGSIPARTDV NPADFDVCSQ AALKAASSPE TRSPRPRMVI PSDVEGEIED MLVEFFGSTM
SPEEGAEQFS DLLQ
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