| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9149 |
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| Symbol | hyuB |
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| ID | 7367699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | + |
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| Start bp | 115141 |
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| End bp | 116841 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643644344 |
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| Product | hydantoin utilization protein |
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| Protein accession | YP_002542641 |
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| Protein GI | 222083238 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.288319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAGA CCGCGACCGT GCTTCACGAC CCGATCACGC TGGAAATCCT CTCGAACGCG
TTGCGCTCGG TGGCGGACGA GACCTTTGTC GCCCTGCAGA AGAGTGCGTT TTCCACGAAT
ATCAAAGAGC GCCACGACCA TTCTACCGCC TTGTTCGACA GTAGCGGCCG CCTCGTCATG
CAAGCCCAGA AATCCCTGCC GCTCCATGTG GGTGCGATGT CCGGCACGGT GGCCAAGGTC
GTCGAGAAAT ATGGCACCGA CATCCACGAG GGCGATGTTT TCGTCGCAAA CGATCCCTAC
GCCGCATCCG GCACCCATTT GCCCGACATC TGCATATCCG CGCCCATCTT TTTCGACGGG
CAACTGATCG GTTTCAGCAG TTCGACCGCA CATCACGCCG ATATCGGCGG CGCGAGTGTT
GGTGGGTCGG CCGCCGGGTT GACCGAGATC TTTCAGGAGG GCTTGCGGAT TCCAATGATC
CGCCTTTTCT CGGAAGGGAT GGTGAACCAG GAGCTGTTCG ACCTCCTGCT GTTGAACGTG
CGGCGGTCGG AAGAGCGCAA GGGCGACTAT AATGCTCAGT TTGCGGCGGT AGCACTCGGC
GTCAAGCGCA TGCAGGAGAT GTGCCGCCGT TATGGTGGGC CTTACGTTGC TGCTGCCTTC
GATGAGATCA TCGCCCGGAC CAAAAAGCGG ATGGAGAGGG CGATCGCGAG CATTCCGCAA
GGCGAATATG CCTTTTCTGA CATTATCGAT GACGACGGGC TGGGGAATGA GAACATCCCC
GTTGCAGTCC GGATCATCAA AAGCGCGGAT CGCCTCACCG TCGATTTCGA GGGATCTGCC
CCCCAGACCG CAGGAAATAT CAACTCCCCC TGGGCGGATA CTGTCGCAAC CGTCATCTAT
GTATTGAAGT GTGTCCTGGA CCCGCACATC CCCAGCAATC ATGGCCTGTT TGCAACGGTC
GACGTCGTAG CGCCAAAGGG GTCAATCGTC AGGGCGGAGT TTCCGGCCTC CGTGACAAAT
CGCTCTACGA CTGCACAGCG TGTGGTGGAT ATCATGATCG GAGCCCTGGC TCAGGCACTG
CCCGACCGGG TGGTCGCCGC CTCAAACGGT GCCAATACCG GTATCTATTT TTACGGTACC
GACCATCGCA CCGGCAAGCC GTTTTACTTT TTCGAAACGA TGGGAGGCGG CTTCGGCGCT
CGCCCGGAAA AGGACGGAAA GGACGCTGTC CAAGTTCACA CTACCAATAC CGCCAATACG
CCCGTCGAAG CGCTCGAAAG AGAATTTCCG CTGTTTGTCG AGGAGTATTC GGTGGTGGAG
AATTCCGGTG GCGCAGGTCG TCAGCGCGGC GGCTGTGGGC TGCGTCGCAT CGTCAGGCCG
CTTGGTCAAT CCTGCACATT CGGGGGGACT GGCGAGCGCT TTAATAACCG CCCATGGGGT
TTGTTTGGTG GTCAGCCCGG GGAGATGGGC AGCTTCGCGA TCTCGGGCGA CGATGGAAGC
ATGACGCGCC TGCCGAACAA GATCCCCAAA GTGCCTGTGG CACCCGACCA GACCGTCGTC
ATGCAAACGG CTGGCGCCGG CGGATATGGC GATCCCGCCG AGCGTACGCC CGCCGCGGTC
CATGACGATC TTCTCGATGG GCTTTTCTCC CGTGCGTATC TCGAAAAACA TTACCCCGCA
CAGATCAAGA GCGCCGAGTA A
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| Protein sequence | MSETATVLHD PITLEILSNA LRSVADETFV ALQKSAFSTN IKERHDHSTA LFDSSGRLVM
QAQKSLPLHV GAMSGTVAKV VEKYGTDIHE GDVFVANDPY AASGTHLPDI CISAPIFFDG
QLIGFSSSTA HHADIGGASV GGSAAGLTEI FQEGLRIPMI RLFSEGMVNQ ELFDLLLLNV
RRSEERKGDY NAQFAAVALG VKRMQEMCRR YGGPYVAAAF DEIIARTKKR MERAIASIPQ
GEYAFSDIID DDGLGNENIP VAVRIIKSAD RLTVDFEGSA PQTAGNINSP WADTVATVIY
VLKCVLDPHI PSNHGLFATV DVVAPKGSIV RAEFPASVTN RSTTAQRVVD IMIGALAQAL
PDRVVAASNG ANTGIYFYGT DHRTGKPFYF FETMGGGFGA RPEKDGKDAV QVHTTNTANT
PVEALEREFP LFVEEYSVVE NSGGAGRQRG GCGLRRIVRP LGQSCTFGGT GERFNNRPWG
LFGGQPGEMG SFAISGDDGS MTRLPNKIPK VPVAPDQTVV MQTAGAGGYG DPAERTPAAV
HDDLLDGLFS RAYLEKHYPA QIKSAE
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