Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_9128 |
Symbol | hyuA |
ID | 7367682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011984 |
Strand | + |
Start bp | 93805 |
End bp | 95847 |
Gene Length | 2043 bp |
Protein Length | 680 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643644329 |
Product | hydantoin utilization protein |
Protein accession | YP_002542626 |
Protein GI | 222083223 |
COG category | [E] Amino acid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAATC AGTCTCGTTT CATGCTTGGT ATTGATGTCG GCGGCACGTT CACCGACTTC GTCGCCTATG ATCGCGAAAA GCGCACCATC AATGTGTGGA AGGTCAGATC CGTACCGACG GATCCTGTCG TCGGCATCCT GAATGGCCTC TCCGAGTTCG CGCACAGGGA CGAGATCGAT TATGTTCGCC TCGGCACGAC GGTTGGCACG AACGCAGTGC TCGAGCGCAA AGGCGCAACA GTTGCCTATG TCACGACAAG GGGCTTCCGC GATATTCCCT TCATTCAGCG CGGAAATCGC CGCTATCACT ATGATATGAG CTGGGTGAAG CCGACGCCTC TGGTCAAGCG AAGCCATTCC TTCGAGCTGA CCGAGCGTCT TGATGCCAAG GGCAACGTGC TCATGGCGCT AGACGAAGCA GAGGTCCGGA CCCTGGCGGC GACCATCCGT GCCATGCCGG ATATTCAAGC GGTTGCCGTT TGCACCCTGT TTTCCTACGT GAACCCCGTG CACGAGCTGC GCATCAAGGC AATCCTCGCC GAAGAGCTGC CAGGTCTACC GATCACGGCG TCCTATGAAA TTCTTCCGAA ATGGAAGGAA TATGAACGTG CATCGACCGC CATCGCCGAT GCCTATTTGA AGCCTGTCGT CACCCGCCAG CTTGCCAGCA TGCGCAAGCG TCTGGACGAG GCAAAGATGG ATGCCAATGT CGTCGTTATC AAATCGAACG GCGGTGAGAT GACGCTGGAC GCGGCCGCGA ACGCGCCGGT CAATCTCGTT CTCTCCGGTC CGACCGGCGG CGTCATCGCC AGCCGTGCCG TTGCCAAGCT CACCGGCATC GAAAACCTCG TCACCATCGA CATCGGCGGA ACGTCAAGCG ACGTCGCCAC TGTTTTGGAC GGTCGCGAGC GTTTCACCAC CGCATTCGAA ATCGAATGGG GCATGCCGAT CCAGATCCCA ATGATCGACA TCCGCACGAT CGGCGCCGGT GGCGGCTCTA TTGCCTGGAT CGACAATGGC GGCATGCTGC GCGTCGGCCC GCAGAGCGCC GGAGCAAATC CTGGGCCTGC CTGCTACAGC GGGGGCGGAA CACTTCCAAC GGTCACGGAC GCCAATGTCG TGCTCGGCCG CATCGATCCC AACAACTTCC TCGGCGGCCG CATGAAGCTC GACGCTGAAG CGGCGCGAGT TGCCGTATCG AGTGTTGCCG AGAAACTGGG TCGCAGCATT GAGGACACAG CATTGGCAAT CCTCAAAATC GCCAACAACA ACATGGTCGG CGCGCTTCGT ACTGTTCTCA TCGAACAGGG TCTTGATCCC CGGGACTTTA CACTGGCCGG CTTTGGCGGT GCAGGTCCCC TGCATACCAA TGACCTTGCC GCTGATATGG GAATTCCGAG AGCTTTGGTT CCCAACCATC CGGGCCAGTT CTCGGCTTCC GGCTTCATAC TGACCGACGC CCGCGTCGAT CGGCAGCGCA CGACGCATAT TACCAGCAGG CACTACGACC CGGTGCTCGG CCAGTCCATC CTTTCCCAGC TGATCGCCGA GGCGACGGCG GAGCTGCATG AACAGGGCTA CACCACTGAC ATCGAGGGGC ACTACCTGCT CGAGATGCGC TATCTCGGCC AGAACTATGA ACTTGAAATG CGGATCGACG AGACGGCCTT CGAGGCTGCC GATGGCAGCG CGCTCTGGGA GGCATTCCAT CGCGCACACA AGGCCCGTTT CGGTTTCTCC TCGCCGGGCG ACATCATGGA AATCGTAAGC TGCGCCGTCA CCCTTGTGGC AACGACGCCC AAGCCGGATA TCCTTCGGCT GGAGCGCACC GCGGGAACCG CGAAGCCGAA ATCGGCGCGG TCGGTCTATT TTGCCGACGG TTCGCATCAG GCGCCGGTCT ACGATCGCGG CGACCTGCTG TTCGGAGACG TCATTCCCGG TCCAGCCGTT GTCGAGGAGC CTGCATCCGT CACGGTGCTC AATCCCGGCA GCACGCTGTC CGTTGACGAG TTCGGAAATC TGATCATCGA CATCCTCGCC TGA
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Protein sequence | MDNQSRFMLG IDVGGTFTDF VAYDREKRTI NVWKVRSVPT DPVVGILNGL SEFAHRDEID YVRLGTTVGT NAVLERKGAT VAYVTTRGFR DIPFIQRGNR RYHYDMSWVK PTPLVKRSHS FELTERLDAK GNVLMALDEA EVRTLAATIR AMPDIQAVAV CTLFSYVNPV HELRIKAILA EELPGLPITA SYEILPKWKE YERASTAIAD AYLKPVVTRQ LASMRKRLDE AKMDANVVVI KSNGGEMTLD AAANAPVNLV LSGPTGGVIA SRAVAKLTGI ENLVTIDIGG TSSDVATVLD GRERFTTAFE IEWGMPIQIP MIDIRTIGAG GGSIAWIDNG GMLRVGPQSA GANPGPACYS GGGTLPTVTD ANVVLGRIDP NNFLGGRMKL DAEAARVAVS SVAEKLGRSI EDTALAILKI ANNNMVGALR TVLIEQGLDP RDFTLAGFGG AGPLHTNDLA ADMGIPRALV PNHPGQFSAS GFILTDARVD RQRTTHITSR HYDPVLGQSI LSQLIAEATA ELHEQGYTTD IEGHYLLEMR YLGQNYELEM RIDETAFEAA DGSALWEAFH RAHKARFGFS SPGDIMEIVS CAVTLVATTP KPDILRLERT AGTAKPKSAR SVYFADGSHQ APVYDRGDLL FGDVIPGPAV VEEPASVTVL NPGSTLSVDE FGNLIIDILA
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