Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_9044 |
Symbol | |
ID | 7367782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011984 |
Strand | - |
Start bp | 30063 |
End bp | 30977 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643644276 |
Product | hypothetical protein |
Protein accession | YP_002542573 |
Protein GI | 222083170 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0742912 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGAAC CCGTTTCTAC CCACCTCTCG CGCGATATCG CCTATGGCGT CGATGGCGGA TCGACCGCAG CGCTCTACAA AGTCTCGTGG GGCGCCATCC TTGCTGGCGT TTTCGTCGGA CTGGCTGTCC AGTTTCTTCT CAACCTCCTT GGCGTGGGTA TCGGCGCAGC GGTTATCGAC CCGGCGCGTT ACGATAACCC CGATGCCAGC ACATTCTCGA TCGCCGGCGG TCTGTGGTTT GTGGTCGCCG GTCTGATCGC CTCCTTCGTC GGTGGCTACA TCGCCAGCCG TCTTTCCGGC CGTCCGAGCA ATTCGACCGG CGGCTACCAG GGTCTGACCA CCTGGGCGGT GACCACGCTG GTTATTCTCT ATTTGCTGAC CACCTCCGTC GGCGCTCTGG TCGGCGGTGC GTTCAGCGGT CTGTCGAGCA TTGTCAGCGG CGTTGGCAGC ACGACGGCGA CAGCGGTGAC CGCAGCAGCC CCAGCGATGG CCAACTCGGC AAACCCAATG GCCGGGATTG AACAGCAGAT CCGCGACGCC TCGGGCGGCA ATGATCCGGA AGCGCTGCGC AATGCTGCCA TCTCCGCAGT TCAGGCCGCC GTCACCGGCG ACACTGCAAA GGCGGACGAT GCCCGCAACC GTGCCGCGGA CGCGATCGCC AAGGCCCAGA ACATTCCGGT TGATCAGGCC CGCACTCAGG TCGATCAGTA CATGAAGACT TATAATGACA ACGTGCAGGC TGCCAAGGCC CAGGCGCTTG AAGCTGCACA GACCGCGACC AAAGCCGTCT CGGCCGGTGC GATCCTCGGC TTCATTGCTC TCCTGATCGG TGCAATCGCC GCCTGGTTCG GTGGGGTCTA CGGCACCAAG CATAACCTTT ATGCCACCGA GACCTCCGTT CGCCACGTCC GTTAA
|
Protein sequence | MTEPVSTHLS RDIAYGVDGG STAALYKVSW GAILAGVFVG LAVQFLLNLL GVGIGAAVID PARYDNPDAS TFSIAGGLWF VVAGLIASFV GGYIASRLSG RPSNSTGGYQ GLTTWAVTTL VILYLLTTSV GALVGGAFSG LSSIVSGVGS TTATAVTAAA PAMANSANPM AGIEQQIRDA SGGNDPEALR NAAISAVQAA VTGDTAKADD ARNRAADAIA KAQNIPVDQA RTQVDQYMKT YNDNVQAAKA QALEAAQTAT KAVSAGAILG FIALLIGAIA AWFGGVYGTK HNLYATETSV RHVR
|
| |