Gene Avi_9035 details

Gene Information

• Locus tag: Avi_9035
• ID: 7367774
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011984
• Strand: -
• Start bp: 21766
• End bp: 22341
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 643644268
• Product: transposase IS4 family protein
• Protein accession: YP_002542565
• Protein GI: 222083162

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTGAAGACCG ATTTCGACGG ACATCCCATC GCCTTTGATC TGACCGGGGG CGAGAAAGGT 
GACGCTCCGC ACTTTCCAAT CCTGCTTGGC CTTGGCCCCG ATGTAGATCC CCGCGCCGCC 
ATGGGCGACA AGGGCTATGA CAGCAAGGCT AACCGCCAGG CCGCAAGAAG GCGGGGTGCG 
GTTCCCGTCA TTCCTTATCG TTCAACGGCA AAAATCAAAG CCGACGTTCT TTCCCAAAGC 
GCTCTACAAA GGTCGCGCCC GCATCGAGCA AGCAATCGGA AAACTCAAGC GCTTCAAGCG 
CGTTGCGCTA CGATGCGAGA AGACCAAACA AAATTTCTCC TCCATCGTCG CAATCGCCGC 
AGGCTTCATC TTGATCAAAT CCGTCCACAC TGCCTAGTTG AAGGCGGCCT GAATGACGAG 
ATGCGGTTGC TTGAGGTTCC ATGTCGACGC CAGATTTCAC GCTCGATCTC AATAAGACAA 
TTCGTATCTG AACTGCGTTC CGTTCGCCAA ACATACACCC ATTTCCCCTT TCGTGGAAAG 
CGATGGCGTC CTCCTCCTCA CAGAGGATCC AGATAA 

 

Protein sequence

MKTDFDGHPI AFDLTGGEKG DAPHFPILLG LGPDVDPRAA MGDKGYDSKA NRQAARRRGA 
VPVIPYRSTA KIKADVLSQS ALQRSRPHRA SNRKTQALQA RCATMREDQT KFLLHRRNRR 
RLHLDQIRPH CLVEGGLNDE MRLLEVPCRR QISRSISIRQ FVSELRSVRQ TYTHFPFRGK 
RWRPPPHRGS R