Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_8201 |
Symbol | repC |
ID | 7365096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011982 |
Strand | + |
Start bp | 144222 |
End bp | 145484 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643641795 |
Product | replication protein C |
Protein accession | YP_002540092 |
Protein GI | 222080229 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAAT TATCGTCAGT CGCGTCATTT CGACGCGTCA CTCCCGGAAT TGCTGCAAGC GCGCGTCTTG CAATGGCAAA CAATGTTCCT GATACAACCA AGTCCGAAAT AGCGCTGCTT TTGAAGAAGG CAGCTCCAAT TTTAGGCATC GACGGCCCCA CCTATCACGT CATGGATATC CTTCTTGGCC TTTCTCGGGC CGATGACTGG AGGGGCTCTG GTCGTCCGAT TGTGGCGATA TCGAATGCGA AGCTGGCGGA ATATATAATG CGTTCAGAAC GCACGGTAAA TAGATGTATC CGACGGCTAG TTGAAGCTGG TATCGCGGCT TATCGAGACA GCTCAACGGG CCGACGGTTT GTATACCGCA ATAAAGCTGG TGAGGTGATG GCCGGCTTTG GAATCGATTT CACACCAGCC CGAGTGAGGG CTGACGAACT AAAGCAGGCC GTTGATCAGT ACCAACAACG ACTGAACATC GAACTGGCAG CCAAGCGCGA CATCAGCCGG TTGTCACGTG CAATCGAAGA CCTTTGCACC TGTAATCCAT CAGGTGTCAC GACTGAAAAA TTGGAACTCC AGGCGATATT GGGGGATAGC GACGGCGTTA TTGAGCGGGC GGAGCGGATA AGGCAACTAC ACCTACAGAC GTTAGCTAGG CTGGCCCCAG AATACGTTCC GTTCGATATG ACATGCGAGG GTGACACCGG CGTCACTCCA GATATCGATA CAAACCCAGA ATCTCTCTCT GAAAGTAATA AAATGCCGAC CCGCTCTAAC GAGCGGGGCA TTTTTCAAGA AAACGGCCGC TACGCGGCCG AAGGGGCTTT TGAAAAAAAT CCTACGAATG CCACGGTTGC GATGCAAGAT AAGACTGACG GCGAGGATCG TGATGCAGAC ACAGTCCAGG GTGAGGTTTT GGGCTCCGTG TCTGTGGGGC TCCTCCAGGC AGCCTGTCCA GGGGCCCAGG CGATGATTGC ACAGCAGTTT GACAGCTGGT CTGCACTCGG TCGATCTGGG GAGAGGCTTC GCCGGATGAT AGGTCTGTCC GAAGCGGGCT GGGCTGATGG TCAGAAGAAA GTTGGCCCTT ACGCTGCCGC GGCGATCTTG GCGACAGTAC TTGAAAAGTC AATTCGTGAC CCTGAGCAGA TTTCTAAACC TGGCGGCTAT TTCCGAGCAA TGATTGATCG AGCCATTGAT GGTCGACTGA ATTTGGAGCG CAGTCTTTTT GGGCTTGCCG ACCGCGGGTA TGGTAATCCC TAG
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Protein sequence | MTELSSVASF RRVTPGIAAS ARLAMANNVP DTTKSEIALL LKKAAPILGI DGPTYHVMDI LLGLSRADDW RGSGRPIVAI SNAKLAEYIM RSERTVNRCI RRLVEAGIAA YRDSSTGRRF VYRNKAGEVM AGFGIDFTPA RVRADELKQA VDQYQQRLNI ELAAKRDISR LSRAIEDLCT CNPSGVTTEK LELQAILGDS DGVIERAERI RQLHLQTLAR LAPEYVPFDM TCEGDTGVTP DIDTNPESLS ESNKMPTRSN ERGIFQENGR YAAEGAFEKN PTNATVAMQD KTDGEDRDAD TVQGEVLGSV SVGLLQAACP GAQAMIAQQF DSWSALGRSG ERLRRMIGLS EAGWADGQKK VGPYAAAAIL ATVLEKSIRD PEQISKPGGY FRAMIDRAID GRLNLERSLF GLADRGYGNP
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